PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026442210.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 184aa    MW: 20915.2 Da    PI: 9.3188
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026442210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH36.21e-11132157126
                     --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                     y+  +C+++ +tG+C +Gd+CkF H+
  XP_026442210.1 132 YRPDICKDYKQTGYCGFGDSCKFVHD 157
                     77899********************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MADSEPSKEP VSSFFRKPSK NKNIRKQKNE GEKEEKEEDF KGSSVIIQKP KSAPKADIKL  60
HFSTGTLTKQ LAETNQEAAE SRRFYFDSSK EIQVQHDSRA TAAYTVSGEK AGGAHGPLRA  120
STHIRTSTRW DYRPDICKDY KQTGYCGFGD SCKFVHDGGD YKSGWQTERE WEEAEKIRKR  180
NLAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01350.13e-54C3H family protein