PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026442232.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 233aa    MW: 26384.2 Da    PI: 8.9246
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026442232.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF49.84.4e-161060251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHH.HT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvL.Cdaevaviifsstgklyeyss 51
                    +i++  +r vtfskRr gi  KA EL+ L  d+ v++i+fs++gk +++s+
  XP_026442232.1 10 KIDDPKKRIVTFSKRRSGIERKAAELCRLfADIIVCIIVFSPSGKAFTFSN 60
                    79999**********************8868******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MGRKKIAIEK IDDPKKRIVT FSKRRSGIER KAAELCRLFA DIIVCIIVFS PSGKAFTFSN  60
SPRGICNVVE RFVEEQKKDR TQETKNVRES KSSTQWRNVA GAGSGSDKYW WDTMDMEELG  120
SMEKLMSLRE SLAKLKQNLS ARKEKLIALS SLSSSTIEDS IKVEDSITED AIVEDGATSI  180
TEKHNLELNL RWQLNEKVLS SSRRTLSKLP PYRIDIVLEV LFEFASCNVV ATD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22630.13e-15MIKC_MADS family protein