PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026443353.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 414aa MW: 46685.9 Da PI: 6.0406

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026443353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.1e-17	17	63	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W++eEde+l+++++ +G g+W+++++ g+ R++k+c++rw +yl XP_026443353.1 17 GLWSPEEDEKLIKCIATHGHGCWSSVPKLAGLERCGKSCRLRWINYL 63 67*******************************************97 PP
2	Myb_DNA-binding	49.7	8.2e-16	69	112	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ +++d+++ lG++ W+ Ia++++ gRt++++k++w++ XP_026443353.1 69 RGSFSAQEERIIIDVHRILGNR-WAQIANHLP-GRTDNEVKNFWNS 112 899*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MQQLGHHCCS KQKVKTGLWS PEEDEKLIKC IATHGHGCWS SVPKLAGLER CGKSCRLRWI 60 NYLRPDLKRG SFSAQEERII IDVHRILGNR WAQIANHLPG RTDNEVKNFW NSCIKKKLMA 120 QGLGPKTHNL ISSSTSGSAS SYNNACNNNN NHHIYLQQPT SSFYHSHQHH HQLNSPQKMM 180 VIVNQLSMKY TQEVPATFNV TSALPVQQPR PYRPLCDLVS IPSTNFDYYQ NNNLTNGSNI 240 KYPSVTGSLN LESCFSLMNN DSIGHKSISC SSLVDPSSGT GFEQFSSSED NCIWASSGTA 300 ESYEEAAVTL QPTQHLPDCE EQDEQNYRKQ GQVQENVNVL ALEEHPFEID ESDEVMIKDI 360 SASDTDKRDQ INSLSSFNNT NFSNFEFEFM DSMSCGIYSN MMSSMDDQLI AWDC

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MQQLGHHCCS KQKVKTGLWS PEEDEKLIKC IATHGHGCWS SVPKLAGLER CGKSCRLRWI  60
NYLRPDLKRG SFSAQEERII IDVHRILGNR WAQIANHLPG RTDNEVKNFW NSCIKKKLMA  120
QGLGPKTHNL ISSSTSGSAS SYNNACNNNN NHHIYLQQPT SSFYHSHQHH HQLNSPQKMM  180
VIVNQLSMKY TQEVPATFNV TSALPVQQPR PYRPLCDLVS IPSTNFDYYQ NNNLTNGSNI  240
KYPSVTGSLN LESCFSLMNN DSIGHKSISC SSLVDPSSGT GFEQFSSSED NCIWASSGTA  300
ESYEEAAVTL QPTQHLPDCE EQDEQNYRKQ GQVQENVNVL ALEEHPFEID ESDEVMIKDI  360
SASDTDKRDQ INSLSSFNNT NFSNFEFEFM DSMSCGIYSN MMSSMDDQLI AWDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12720.1	7e-78	MYB family protein