PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026443502.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 203aa    MW: 22315.2 Da    PI: 9.3688
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026443502.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.000793961123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ykC+ C++ F++   L  H  +H
  XP_026443502.1 39 YKCKTCNRQFPSFQALGGHRASH 61
                    9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MMGNKRSGGE MEDISIGEVD PRPVVQKQET SMSSRSRVYK CKTCNRQFPS FQALGGHRAS  60
HKKPRLVNQI SSDSPSSQQQ MRKPKTHACS ICGLEFAVGQ ALGGHMRKHR ATLIDTSPTT  120
EAAAATTTEL SSSSSDITNS TTHEKQPLIP EVRKSNNRIL SLDLDLNLST FPTTTMCSND  180
FEFSTLVAPH KQTSVPPMIY SFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.15e-25C2H2 family protein