PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026443504.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 223aa    MW: 25136.6 Da    PI: 8.9447
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026443504.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.70.00175570116
                    EEETTTTEEESSHHHH CS
         zf-C2H2  1 ykCpdCgksFsrksnL 16
                    y+C+ C+k F++   L
  XP_026443504.1 55 YECKTCDKQFPSFQAL 70
                    99********997776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MKEMMSNKRR GEMEESMAAT MTKCLMLLSR DRGEMDYQSV IQQKIMPSST QGRFYECKTC  60
DKQFPSFQAL GGHRASYKKP RLMELYSSDN HIINYNQQKA KKQKGHECSI CGLTFAIGQA  120
LGGHMRRHRA AMVESSATTA TAETTTTGLS SSSSDDTNIS FQEERLPQVP VLKRSNSSRR  180
VLSLNLDLSL SLLPYVSNDF EFSTIVNEDK HMPSSPSMIY SFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59820.11e-28C2H2 family protein