PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026443594.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 186aa    MW: 20714.9 Da    PI: 6.0339
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026443594.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.4e-112972755
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     +ErrRRd++N ++ eLr+++P +     + ++Ka     ++ YIk Lq
  XP_026443594.1 29 DAERRRRDKLNARLMELRSIVPIL-----TSMTKAVAIDDVITYIKGLQ 72
                    68*********************9.....89*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MKYSGSGSGR GRGTLNEHGI LVFKSKNLDA ERRRRDKLNA RLMELRSIVP ILTSMTKAVA  60
IDDVITYIKG LQKQVEGLSD CLNQMDVAVP QALVEESIVG KVELDQNIEK YTIEEQVKVT  120
SLEGDNLSIK ITTLGYEIMD NNFTSFKGVC LTTLSVKGNR VEITELEKLE ELLLKVVRGL  180
NSNVQL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13136ERRRRD
23237RRRRDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.14e-26bHLH family protein