PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026443839.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 240aa MW: 28335.2 Da PI: 9.5331

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026443839.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.4	2.4e-18	11	103	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 ++Y eY+ + F vr+++++k+ +++t+++fvCs+egkr+++ + + ++ + ++ +++Cka+++v ++ gkw+vtk+ HnH+++ XP_026443839.1 11 DYYTEYGVHERFGVRIRSTNKTrAGYDQVTSAHFVCSREGKRKKDIVDrIDPKSISCSTVQCECKAEMRVLYSTnLGKWRVTKFLDVHNHKFV 103 59*************99999344678************9888456777789999******999989************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MIFNSYEEAY DYYTEYGVHE RFGVRIRSTN KTRAGYDQVT SAHFVCSREG KRKKDIVDRI 60 DPKSISCSTV QCECKAEMRV LYSTNLGKWR VTKFLDVHNH KFVSPLKRIQ LRLNRDMPDA 120 AKNLTEVFNR ENIRIAKVPS VFGGSIIGFD KRNCYNHLRT IRRYELEVGD TQSVLNFFQR 180 KQRENPQFFY SVQVDEEGRA VNFFWVDARS CMAYEHFGDV VTFDTTYRTK KYQMPLAPFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-37	FAR1 family protein