PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026444320.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 227aa    MW: 25106.2 Da    PI: 6.4938
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026444320.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260115.43.5e-3671071100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC++ Cv+apyf+ ++ +++fa+vhk+FGa+nv+k l++lp ++r++a+ ++ yeA ar+rdP yG+v+ i++lqqq++ l++e+
  XP_026444320.1   7 SCGACKFLRRKCNNRCVFAPYFCFDEsASHFAAVHKVFGAANVSKHLSQLPVQDRSEAALTISYEALARIRDPTYGCVAQIFALQQQVAILQKEV 101
                     6*********************997768******************************************************************9 PP

          DUF260  95 allkee 100
                     + l+++
  XP_026444320.1 102 QNLETQ 107
                     988766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MGKHGSSCGA CKFLRRKCNN RCVFAPYFCF DESASHFAAV HKVFGAANVS KHLSQLPVQD  60
RSEAALTISY EALARIRDPT YGCVAQIFAL QQQVAILQKE VQNLETQVAA SRATNVLVNH  120
QSSHAFNDIN SSPFRLSSSQ LHDWNLHNSD ASNLMSIING NVVTLQMNQL FGVEYTNVPN  180
SCQSGQLEQE IFFNDPCWLD VPTISSYSSS TGQVINFPSL LDDIQLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.14e-53LBD family protein