PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026444334.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 245aa MW: 28140.1 Da PI: 10.2736

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026444334.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.4	3e-19	95	183	2	98
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +k +++s+v +l +p++f++++ +ee++t++lede+g +++ +i +k++ l++GWk F+k+++L++gD +vF+l++ ++f +v++ XP_026444334.1 95 VKSMLQSHVYHGFWLNVPNDFCQKYL--TEEKMTIVLEDEEGVKYDTIYIGEKTG----LSGGWKAFAKDHKLDDGDALVFELIKPTRF--KVHI 181 6999*****************995..34779************555554....**********************997777..9999 PP E- CS B3 97 fr 98 f+ XP_026444334.1 182 FK 183 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MENVNSYEEA RKQRLEENRR RFQDLGVDKI VKILTPVAKT FIKDRPLRKK LRSGTSTRVR 60 KAHEKVATAA QRAHAIKRAE DFRVQHVPSS HPSYVKSMLQ SHVYHGFWLN VPNDFCQKYL 120 TEEKMTIVLE DEEGVKYDTI YIGEKTGLSG GWKAFAKDHK LDDGDALVFE LIKPTRFKVH 180 IFKGIIDGVG EANTKKPKKG NRSKPIKKVK NSGAEEEDMV EEVAEQIAKT RERQTRNSKK 240 SGDDF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	47	53	LRKKLRS
2	195	208	KKPKKGNRSKPIKK
3	198	211	KKPKKGNRSKPIKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	7e-42	B3 family protein