PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026445349.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 342aa    MW: 37036.8 Da    PI: 10.6522
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026445349.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.52.1e-1589133347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+e ++++ k+lG+g+W+ I+r++ +++t+ q+ s+ qky
   XP_026445349.1  89 PWTEEEHETFLKGLKKLGKGDWRGISRRFVTTKTPTQVASHAQKY 133
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MTKDSGRKCS SCGNNGHNSR TCKCNSEKQQ MGVKLFGVTI MKKEDESMKK SLSMGNLLHA  60
HNHLDDDRGY LSDGGPKRRD SHERKRGVPW TEEEHETFLK GLKKLGKGDW RGISRRFVTT  120
KTPTQVASHA QKYFLRQKAA SSSSSIKKKR RTSLFDLHRK SNNHHSPLSN LNPTKQLTEQ  180
MAALATTATP RPSMENSIWP KPAASRASVE ASLWPKPAPT CAITPHANIP HMAGGSTGRS  240
NHAGLSMVST MDYANSGYFY ASQSIGKLAI GPPHAAAAAA AAASASFSLA SPQPKFKAQS  300
EELGNSSSPV NTDLKLSIGG HSPMPKDRNK FSSETSNLIS VV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1147151KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.12e-36MYB_related family protein