PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026445475.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 627aa MW: 70033.8 Da PI: 6.4681

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026445475.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.3	1.5e-27	187	240	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ LH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl XP_026445475.1 187 KARVVWSIGLHQQFVSAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 240 68*****************.******************************8 PP
2	Myb_DNA-binding	35	3.3e-11	189	239	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ +++++v av+qlG + +k+I + m+ g+t++++ s++qky+ XP_026445475.1 189 RVVWSIGLHQQFVSAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 239 6689999*******************************************7 PP
3	Response_reg	75.3	2.3e-25	12	120	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++l+++l+ y ev++ +++ +al ll+e++ +Dl+l D+ mp+mdG++ll+ i e +lp+i++++ +++e + + + G XP_026445475.1 12 VLVVDDDLTCLKVLKRMLQMCLY-EVTTYSQAVAALSLLRERKymFDLVLSDVHMPDMDGFKLLELIGLEM-DLPVIMMSMDDKKEVVMKGVTHG 104 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l+Kp+ +e++ + XP_026445475.1 105 ACDYLVKPIRMEAIKN 120 *********99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 627 aa Download sequence
MDKGGFPAGL RVLVVDDDLT CLKVLKRMLQ MCLYEVTTYS QAVAALSLLR ERKYMFDLVL 60 SDVHMPDMDG FKLLELIGLE MDLPVIMMSM DDKKEVVMKG VTHGACDYLV KPIRMEAIKN 120 IWQHVIRKRR HELKELEQTT SVEDTERLQN PTEDADNASS ANEESYKNKR KDEEDDDDKD 180 NNSTVKKARV VWSIGLHQQF VSAVNQLGID KAVPKKILEL MNVPGLTREN VASHLQKYRL 240 YLKRVSGGTQ NGFRPRFGGS PSSIYGSLPS LNEFNLQTFT VPGQLPLQNF ASRQAGIIRS 300 ARHGSLNMHI TSQRNMFSGE LARPRFGVGH QVNNNAQGTL LPGLPSSVGQ TPPLTNLHQQ 360 PLRSSWNTGL QSNGSSTRFV DHVTGFHGTG FPTQFGLFRN NDSSVMMQMP QSQLKGQLIS 420 NDVSRQFPSG NEIPINGRGT TPNQISPASP LVNFPMNRTP ELTGHGYPLG NFTRVSCLQQ 480 VGTFGNEGSS ETKRLPGFNP SYDIIADLRQ NIVEGSDFHD GVLNCETSQN SSTGQSLQVL 540 GHQGFLSNQI NDNREEQQHE VPKNPQENEN FDAKVEYMPE LGTKFFDLSR NWSQDDLMSE 600 LFKQQDGVGM INTGHNFDSF PLDNISV

Sequence ? help Back to Top

Protein Sequence Length: 627 aa Download sequence

MDKGGFPAGL RVLVVDDDLT CLKVLKRMLQ MCLYEVTTYS QAVAALSLLR ERKYMFDLVL  60
SDVHMPDMDG FKLLELIGLE MDLPVIMMSM DDKKEVVMKG VTHGACDYLV KPIRMEAIKN  120
IWQHVIRKRR HELKELEQTT SVEDTERLQN PTEDADNASS ANEESYKNKR KDEEDDDDKD  180
NNSTVKKARV VWSIGLHQQF VSAVNQLGID KAVPKKILEL MNVPGLTREN VASHLQKYRL  240
YLKRVSGGTQ NGFRPRFGGS PSSIYGSLPS LNEFNLQTFT VPGQLPLQNF ASRQAGIIRS  300
ARHGSLNMHI TSQRNMFSGE LARPRFGVGH QVNNNAQGTL LPGLPSSVGQ TPPLTNLHQQ  360
PLRSSWNTGL QSNGSSTRFV DHVTGFHGTG FPTQFGLFRN NDSSVMMQMP QSQLKGQLIS  420
NDVSRQFPSG NEIPINGRGT TPNQISPASP LVNFPMNRTP ELTGHGYPLG NFTRVSCLQQ  480
VGTFGNEGSS ETKRLPGFNP SYDIIADLRQ NIVEGSDFHD GVLNCETSQN SSTGQSLQVL  540
GHQGFLSNQI NDNREEQQHE VPKNPQENEN FDAKVEYMPE LGTKFFDLSR NWSQDDLMSE  600
LFKQQDGVGM INTGHNFDSF PLDNISV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	1e-122	ARR-B family protein