PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026445539.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 591aa MW: 67737.4 Da PI: 8.2943

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026445539.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.7	5.8e-15	57	168	1	98
EEEE-..-HHHHTT-EE--HHH.HTT....................---.....--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHH CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....................ggkke...esktltledesgrsWevkliyrkksgryvltkGWkeFvkan 72 f+k+l + + +++ + +pk+f e++ + e + +tl+de+g ++ vk++y+ ks +++GW++Fvk + XP_026445539.1 57 FCKALERTHLVTRSTFPIPKHFQETItrpneetvtqqneetvtqkdE---EtvtHEEIVTLKDEEGGKYIVKYKYKSKS----FQGGWSGFVKNH 144 77888888889999999***9999999998888776666665542...14556679***********655555....9******* PP T--TT-EEEEEE-SSSEE..EEEEE- CS B3 73 gLkegDfvvFkldgrsefelvvkvfr 98 +L++gD vvF + ++f + v +fr XP_026445539.1 145 DLRVGDAVVFNQI--DRFVFDVYMFR 168 *********44..56655676666 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MLFSIWLEYW LKESTKLDER RYPNVVAKRV PTQQEIDALD RATKFMKSLP DFIESCFCKA 60 LERTHLVTRS TFPIPKHFQE TITRPNEETV TQQNEETVTQ KDEETVTHEE IVTLKDEEGG 120 KYIVKYKYKS KSFQGGWSGF VKNHDLRVGD AVVFNQIDRF VFDVYMFRAR DKSENVVCQH 180 QCKSKCAADK ASTSTSFTEA RESICPEAMS LRTELEELKQ KLLEMAQDRD RLLLQVNSLS 240 YAVKYNGESS VQESKNLLIK TLERDLADVR GKLQVSSKKN MEVQSELESR NKLVDTLKEK 300 LVEAEKLRIK LQNKILELKG NIRVFCRVRP PVHDDGKQIK ISYPKSVEEK GHAIHLSKNG 360 YLHKFAFDRV FDPKAKQEDI FVDVSELVQS ALDGKKVCIF AYGQTGSGKT YTMIGGLDQK 420 DKEEKGIIPR SVEQIFQYFQ SVKTKGWKYN LKVTVLEIYK EQIHDLLDPK SGEQKKYIIS 480 HGKDGKAVVP HLAEEDIYGP EQFISLLKQV SERRCTEHTL MNEQSSRSHL VLTLNISRVT 540 ESSQVHGFLN MIDLAGNENL KESGAIRDRA EEAKAINKSL SAFTGVIQAL V

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MLFSIWLEYW LKESTKLDER RYPNVVAKRV PTQQEIDALD RATKFMKSLP DFIESCFCKA  60
LERTHLVTRS TFPIPKHFQE TITRPNEETV TQQNEETVTQ KDEETVTHEE IVTLKDEEGG  120
KYIVKYKYKS KSFQGGWSGF VKNHDLRVGD AVVFNQIDRF VFDVYMFRAR DKSENVVCQH  180
QCKSKCAADK ASTSTSFTEA RESICPEAMS LRTELEELKQ KLLEMAQDRD RLLLQVNSLS  240
YAVKYNGESS VQESKNLLIK TLERDLADVR GKLQVSSKKN MEVQSELESR NKLVDTLKEK  300
LVEAEKLRIK LQNKILELKG NIRVFCRVRP PVHDDGKQIK ISYPKSVEEK GHAIHLSKNG  360
YLHKFAFDRV FDPKAKQEDI FVDVSELVQS ALDGKKVCIF AYGQTGSGKT YTMIGGLDQK  420
DKEEKGIIPR SVEQIFQYFQ SVKTKGWKYN LKVTVLEIYK EQIHDLLDPK SGEQKKYIIS  480
HGKDGKAVVP HLAEEDIYGP EQFISLLKQV SERRCTEHTL MNEQSSRSHL VLTLNISRVT  540
ESSQVHGFLN MIDLAGNENL KESGAIRDRA EEAKAINKSL SAFTGVIQAL V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	4e-10	B3 family protein