PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026445694.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 194aa    MW: 22678 Da    PI: 10.2022
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026445694.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF58.67.6e-192067249
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                     i nks+ qvtfskRr+g++KKA  LSvL++ae a+i fs+  k y y
  XP_026445694.1 20 NITNKSRLQVTFSKRRKGLFKKATQLSVLTGAETALIDFSHARKPYVY 67
                    799*************************************98876655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MKMKKQRKGG DGRRKIKIEN ITNKSRLQVT FSKRRKGLFK KATQLSVLTG AETALIDFSH  60
ARKPYVYGNP DLILRFVNNN NGEASEIQKD DDEEQRKYMK VKREFEAFSP AGKPFAYGNH  120
DRFMRYMEVE KQLVAEKKRG VFLESLMNCN LGPGNDKSWW ETYMNGLNLD ELIQMRSDME  180
QLQKCVSERS HDLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.14e-19M-type_MADS family protein