PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446121.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 424aa MW: 45796.4 Da PI: 6.7579

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446121.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.1	0.0013	167	188	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C C+k F ++ + H+rtH XP_026446121.1 167 SCYECKKEFFSWKAVHGHMRTH 188 599******************9 PP
2	zf-C2H2	12.2	0.00056	329	351	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C ++F + L H+r+H XP_026446121.1 329 FGCHICLRRFASGQALGGHMRRH 351 56********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MDRRENNENQ SHPLLTSSPD QEHAESTNLD NEESMSRSQD HAEDGVLVIS QGNGDVGSPR 60 RSTPGPVEPN SSRPNVNVED GVGQSATAIP EGDVAVGLPR CFVQGESSAP IPRNVADIDP 120 SSLVFHPGLS TKSGKKTRKN KKVQGIRIGM KEGQPSNPFL DLNRFPSCYE CKKEFFSWKA 180 VHGHMRTHPE REWRGTVPPP NVARPSFPVA ADENRESPAP ATNQEVEVAT GLLLLSFTNS 240 RGVLVSSANN SQDQEPQRSR QVTENSASSS NARYECSVYK KVFLTHQGLG GHRASHKNVK 300 GCHAMDNTAA EHHSAERNGG ETSGTGNIFG CHICLRRFAS GQALGGHMRR HPQRREEASS 360 SAQDPNVDPT SLARIGLVVD LNLPLPPNIP PPPYLRIEND EGSSASSSSS SSSPSPDTSL 420 DLHL

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MDRRENNENQ SHPLLTSSPD QEHAESTNLD NEESMSRSQD HAEDGVLVIS QGNGDVGSPR  60
RSTPGPVEPN SSRPNVNVED GVGQSATAIP EGDVAVGLPR CFVQGESSAP IPRNVADIDP  120
SSLVFHPGLS TKSGKKTRKN KKVQGIRIGM KEGQPSNPFL DLNRFPSCYE CKKEFFSWKA  180
VHGHMRTHPE REWRGTVPPP NVARPSFPVA ADENRESPAP ATNQEVEVAT GLLLLSFTNS  240
RGVLVSSANN SQDQEPQRSR QVTENSASSS NARYECSVYK KVFLTHQGLG GHRASHKNVK  300
GCHAMDNTAA EHHSAERNGG ETSGTGNIFG CHICLRRFAS GQALGGHMRR HPQRREEASS  360
SAQDPNVDPT SLARIGLVVD LNLPLPPNIP PPPYLRIEND EGSSASSSSS SSSPSPDTSL  420
DLHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35280.1	1e-41	C2H2 family protein