PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446127.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Nin-like

Protein Properties

Length: 275aa MW: 31393 Da PI: 10.673

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446127.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	83.2	2.4e-26	54	103	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i+++dl kyF+ +i++AA++L+v+lT+LKr+CR++GI+RWPhRkiksl XP_026446127.1 54 AKITMDDLVKYFDVTINEAANSLNVGLTALKRKCRELGIPRWPHRKIKSL 103 68**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MCEAKEVCTL NSTRKVHSFD LNCLPEDSDE EQTDKSVPDK KVRRRKRAAP ADIAKITMDD 60 LVKYFDVTIN EAANSLNVGL TALKRKCREL GIPRWPHRKI KSLGTLIHNL QEEAERQEQV 120 SKAAALAVVR RQRMLESEKE YIEKKPFVQL QTETKRFRQD IFKRRHIIKA KNNTVKKTRK 180 RRKRKSINNI TNISHQNTST TNNNNNSNNT EDNSSNNSNS TRWANDNNIN NSTTTATNNN 240 TNTTTSNKSR SSSSSTDSTK TTYYQFIPSA TSVGI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	40	46	KKVRRRK
2	163	185	KRRHIIKAKNNTVKKTRKRRKRK
3	176	184	KKTRKRRKR
4	179	185	RKRRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	5e-45	Nin-like family protein