PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446204.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 501aa MW: 55707.5 Da PI: 5.0289

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446204.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.2	1.2e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWTteEd +l ++++ G g+W++ ++ g+ R++k+c++rw +yl XP_026446204.1 14 RGRWTTEEDTILTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	48.7	1.7e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +t+Ed+ +++++ lG++ W+ Ia +++ gRt++++k++w+++l XP_026446204.1 67 RGNISTQEDDMIIKLHSTLGNK-WSVIAGHLP-GRTDNEIKNYWNSHL 112 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MGRAPCCEKV GLKRGRWTTE EDTILTNYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI STQEDDMIIK LHSTLGNKWS VIAGHLPGRT DNEIKNYWNS HLSRRIHTFR 120 RPLHYSKETP SLVTVDTTKL KSTNGGKTYK GGKKSRGNMK KNKLIPSGNN MATRMAERKT 180 TDDDHDHDHD HRKSGCEDDV MITVTPISPQ EKNTQMMDVL RQVEKEKQRT NMDSCDRRDQ 240 GKETIVISGP FHDEVGGILG PSGGSEHQGK GDSVLTLCTG EEEIESGLLN SPYVEQVLLA 300 SGIFCSNEEL IMGNENLGPS SDIDDHNGPI NGHTFSDGAG NRVMGGSNIS DDQNHDFIQS 360 KLITNLMEYS SSSSSSHDQA ETVCDDHVFV SSGNTISDMQ HGSHELCPSS SMNSTTTSSS 420 FTTINTDTIE DSEWVYNWDF DMGNATVDMD LKATSAVWDI EKEEMLSWLW ENDDTGDDAA 480 ATIPESEKQQ ALADWFLSLT R

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MGRAPCCEKV GLKRGRWTTE EDTILTNYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRADLKRGNI STQEDDMIIK LHSTLGNKWS VIAGHLPGRT DNEIKNYWNS HLSRRIHTFR  120
RPLHYSKETP SLVTVDTTKL KSTNGGKTYK GGKKSRGNMK KNKLIPSGNN MATRMAERKT  180
TDDDHDHDHD HRKSGCEDDV MITVTPISPQ EKNTQMMDVL RQVEKEKQRT NMDSCDRRDQ  240
GKETIVISGP FHDEVGGILG PSGGSEHQGK GDSVLTLCTG EEEIESGLLN SPYVEQVLLA  300
SGIFCSNEEL IMGNENLGPS SDIDDHNGPI NGHTFSDGAG NRVMGGSNIS DDQNHDFIQS  360
KLITNLMEYS SSSSSSHDQA ETVCDDHVFV SSGNTISDMQ HGSHELCPSS SMNSTTTSSS  420
FTTINTDTIE DSEWVYNWDF DMGNATVDMD LKATSAVWDI EKEEMLSWLW ENDDTGDDAA  480
ATIPESEKQQ ALADWFLSLT R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	5e-73	MYB family protein