PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026446205.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 437aa    MW: 48431.2 Da    PI: 4.8028
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026446205.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.43.2e-0825482448
                     HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                     W+ Ia +++ gRt++++k++w+++l
   XP_026446205.1 25 WSVIAGHLP-GRTDNEIKNYWNSHL 48
                     *********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    
MHGVAARRTI RPELANPCTA RKPWWSVIAG HLPGRTDNEI KNYWNSHLSR RIHTFRRPLH  60
YSKETPSLVT VDTTKLKSTN GGKTYKGGKK SRGNMKKNKL IPSGNNMATR MAERKTTDDD  120
HDHDHDHRKS GCEDDVMITV TPISPQEKNT QMMDVLRQVE KEKQRTNMDS CDRRDQGKET  180
IVISGPFHDE VGGILGPSGG SEHQGKGDSV LTLCTGEEEI ESGLLNSPYV EQVLLASGIF  240
CSNEELIMGN ENLGPSSDID DHNGPINGHT FSDGAGNRVM GGSNISDDQN HDFIQSKLIT  300
NLMEYSSSSS SSHDQAETVC DDHVFVSSGN TISDMQHGSH ELCPSSSMNS TTTSSSFTTI  360
NTDTIEDSEW VYNWDFDMGN ATVDMDLKAT SAVWDIEKEE MLSWLWENDD TGDDAAATIP  420
ESEKQQALAD WFLSLTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.12e-14MYB family protein