PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446221.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CAMTA

Protein Properties

Length: 897aa MW: 100889 Da PI: 6.857

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446221.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	158.6	1.2e-49	30	146	2	117
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 l+e ++rwl+++ei+a+L n + ++++ ++ + pksg+++L++rk++r+fr+DG++wkkkkdgktv+E+he+LKvg+ e +++yYah+ + ptf XP_026446221.1 30 LEEaSSRWLRPNEIHAVLYNSSLFTIHVKPMNLPKSGTVVLFDRKMLRNFRRDGHNWKKKKDGKTVKEAHEHLKVGTEERIHVYYAHGLDSPTFV 124 455599*************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylev 117 rrcywlL++++e+ivlvhy+e+ XP_026446221.1 125 RRCYWLLDKKYENIVLVHYRET 146 ******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 897 aa Download sequence
MANIGDGVRL AGAEIHGFHT WQDLDYETML EEASSRWLRP NEIHAVLYNS SLFTIHVKPM 60 NLPKSGTVVL FDRKMLRNFR RDGHNWKKKK DGKTVKEAHE HLKVGTEERI HVYYAHGLDS 120 PTFVRRCYWL LDKKYENIVL VHYRETSETL SSPATPVTST SGSTYSDSAV SKVLLEETDT 180 GANNAENYHV KTLHEINTLD WDDLLVTNEP IGSTHETDNF SCLEEWNQNE SKYNSGLLPS 240 DNVNKHDSSF HGSTNTTSVH PSIDGRLPTS GHFQTVVTQA NSNVRKEGFE PLVEGADGLL 300 AQDSFGRWMN YVMTESPGSL DNPSGGSSIS NGYGSNINGE VDHHHSSIHK QVFTITEISP 360 TWAFSSEETK VIVIGYFNGG PSHLADSDLL MILGDECVPA EMIQHGVYRC KALPHSPGLV 420 NLHLSMDGQT PISQVMSFEY RSPSVVNEVA SPNDEPSRDE FQIQIRLAHL LFSSSSSLSI 480 LSNKASPTVL KEAKKFAHST SSIIKDWDYL IKSAVNNDIS FQQAQKSLFE IILKNKLHEW 540 LLERVIEGSK ISARDHQGLG IIHLCAILGY TWAVRPFSRS GLSLDFRDSR GWTALHYAAH 600 FGREEMVAVL LSSGANPSLV TDPTSEFPGG CTSADLAAQN GYEGLAAYLA EKGLTEHFKR 660 MSLSGNISGS LQTSSTDIVD PSGLNEEELC QKDTLTAYRT AADAAARIQA AFRENTLKLK 720 TEAVNQANPE LEARNIISAM RIQRAFRNYE SRRQMAAAAR IQYTYRTWKI RKEFLYLRRQ 780 TIKIQAAFRG LQARKNYRKI CWSVGVLEKA IMRWRKKRKG LRGLQVEPTM VDAVDPNDEN 840 VVEDFFIISR KQAEDRVERS VVRVQALFRS YRAQQQYRRM KLACDQAELD ELFEPDL

Sequence ? help Back to Top

Protein Sequence Length: 897 aa Download sequence

MANIGDGVRL AGAEIHGFHT WQDLDYETML EEASSRWLRP NEIHAVLYNS SLFTIHVKPM  60
NLPKSGTVVL FDRKMLRNFR RDGHNWKKKK DGKTVKEAHE HLKVGTEERI HVYYAHGLDS  120
PTFVRRCYWL LDKKYENIVL VHYRETSETL SSPATPVTST SGSTYSDSAV SKVLLEETDT  180
GANNAENYHV KTLHEINTLD WDDLLVTNEP IGSTHETDNF SCLEEWNQNE SKYNSGLLPS  240
DNVNKHDSSF HGSTNTTSVH PSIDGRLPTS GHFQTVVTQA NSNVRKEGFE PLVEGADGLL  300
AQDSFGRWMN YVMTESPGSL DNPSGGSSIS NGYGSNINGE VDHHHSSIHK QVFTITEISP  360
TWAFSSEETK VIVIGYFNGG PSHLADSDLL MILGDECVPA EMIQHGVYRC KALPHSPGLV  420
NLHLSMDGQT PISQVMSFEY RSPSVVNEVA SPNDEPSRDE FQIQIRLAHL LFSSSSSLSI  480
LSNKASPTVL KEAKKFAHST SSIIKDWDYL IKSAVNNDIS FQQAQKSLFE IILKNKLHEW  540
LLERVIEGSK ISARDHQGLG IIHLCAILGY TWAVRPFSRS GLSLDFRDSR GWTALHYAAH  600
FGREEMVAVL LSSGANPSLV TDPTSEFPGG CTSADLAAQN GYEGLAAYLA EKGLTEHFKR  660
MSLSGNISGS LQTSSTDIVD PSGLNEEELC QKDTLTAYRT AADAAARIQA AFRENTLKLK  720
TEAVNQANPE LEARNIISAM RIQRAFRNYE SRRQMAAAAR IQYTYRTWKI RKEFLYLRRQ  780
TIKIQAAFRG LQARKNYRKI CWSVGVLEKA IMRWRKKRKG LRGLQVEPTM VDAVDPNDEN  840
VVEDFFIISR KQAEDRVERS VVRVQALFRS YRAQQQYRRM KLACDQAELD ELFEPDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein