PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446352.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CAMTA

Protein Properties

Length: 1034aa MW: 115345 Da PI: 7.2877

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	178.6	7.7e-56	21	135	3	117
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 + k rwl+++e+++iL n++++ +t +++ +p+ gsl+L++rk +ryfrkDG++w+kkkdgktvrE+hekLK g+v+vl+cyYah+e+n++fqrr XP_026446352.1 21 EAKLRWLRPNEVCEILRNYQRFIITPDPPYKPSGGSLFLFDRKALRYFRKDGHNWRKKKDGKTVREAHEKLKAGSVDVLHCYYAHGEDNENFQRR 115 4499***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylev 117 cyw+L+++le+ivlvhy+e XP_026446352.1 116 CYWMLDTQLEHIVLVHYREI 135 ***************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1034 aa Download sequence
MGENRRYILN QHLDISQILA EAKLRWLRPN EVCEILRNYQ RFIITPDPPY KPSGGSLFLF 60 DRKALRYFRK DGHNWRKKKD GKTVREAHEK LKAGSVDVLH CYYAHGEDNE NFQRRCYWML 120 DTQLEHIVLV HYREIKEGNR SGISHLVNAD LGAPAGTARA YPAPSAQVDS TGRTIQASYA 180 SSPSTAEWNG QTRSSEFEDV DSRTDQETSS SSRAMSCSRS QNSSLHSSDI AGFPVVSRSS 240 HGAGFRGGIF DHDNCHSLCP EAHCSIRNIG CMPDERIPFN QPERTEAVSR LTAAALETCS 300 LVKDELGDAN MVLPDTHFHT LRRGSETPVQ ECPSNKDGQT RYVISNNLAV GGAAAHIFQF 360 PQDHNFQLLH LHFQNKPGAP MLDNDNDIPL VEKATLENES HKNGEARELK KLDSFGRWMN 420 EEIGVDCEDS LMASDSGNYW NTLDTQKDDK EVSSLSRHMQ LDIDSPSPSL SHDQLFSIRD 480 FSPDWAFSGV ETKVLITGSF LRDQKHLSSK KWCCMFGEVE VPAEILTDTV LRCQAPVHSL 540 GRVPFYITCS NRLACSEVRE FEYRENASEP SPLAVKIEGE EEASIQVRMA KMLYLGLDRE 600 LLNCSVQNCV KCALRNVSSS FGSDEEKEWG EIEEASVSGN RKNPKDALIE KLLKDRLYEW 660 LVSKIHEGGR GANVLDAKGQ GVIHLAASLG YGWAMAAIVA AGVSPNFRDA QGRTGLHWAA 720 HYGREETVVA LVKLGAAPGA VEDPTSKFPG GRTAADLASS RGHKGIAGYL AEADLTSHLS 780 LMTIKESVID SVAASIAAEK AIETVEEQSI APDQSKEGLF SMRSSREAVK KSAQAADLIK 840 AAFARSFHHK KESVKIKDEI SEIPADIVTV ASFTNKVSSM NHFTDYLHSA SAALKIQHKY 900 RGWKARKDFL KIRNRIVKIQ AVVRGHQART YYKKVLWSVG IVEKVILRWR RKGPGFRGFC 960 ADKSIGNTLP DNEKIDEYDF LREGRKQKVA GVEKALARVQ SMARYPESRD QYMRLKSSEK 1020 GIENENITAV TNHD

Sequence ? help Back to Top

Protein Sequence Length: 1034 aa Download sequence

MGENRRYILN QHLDISQILA EAKLRWLRPN EVCEILRNYQ RFIITPDPPY KPSGGSLFLF  60
DRKALRYFRK DGHNWRKKKD GKTVREAHEK LKAGSVDVLH CYYAHGEDNE NFQRRCYWML  120
DTQLEHIVLV HYREIKEGNR SGISHLVNAD LGAPAGTARA YPAPSAQVDS TGRTIQASYA  180
SSPSTAEWNG QTRSSEFEDV DSRTDQETSS SSRAMSCSRS QNSSLHSSDI AGFPVVSRSS  240
HGAGFRGGIF DHDNCHSLCP EAHCSIRNIG CMPDERIPFN QPERTEAVSR LTAAALETCS  300
LVKDELGDAN MVLPDTHFHT LRRGSETPVQ ECPSNKDGQT RYVISNNLAV GGAAAHIFQF  360
PQDHNFQLLH LHFQNKPGAP MLDNDNDIPL VEKATLENES HKNGEARELK KLDSFGRWMN  420
EEIGVDCEDS LMASDSGNYW NTLDTQKDDK EVSSLSRHMQ LDIDSPSPSL SHDQLFSIRD  480
FSPDWAFSGV ETKVLITGSF LRDQKHLSSK KWCCMFGEVE VPAEILTDTV LRCQAPVHSL  540
GRVPFYITCS NRLACSEVRE FEYRENASEP SPLAVKIEGE EEASIQVRMA KMLYLGLDRE  600
LLNCSVQNCV KCALRNVSSS FGSDEEKEWG EIEEASVSGN RKNPKDALIE KLLKDRLYEW  660
LVSKIHEGGR GANVLDAKGQ GVIHLAASLG YGWAMAAIVA AGVSPNFRDA QGRTGLHWAA  720
HYGREETVVA LVKLGAAPGA VEDPTSKFPG GRTAADLASS RGHKGIAGYL AEADLTSHLS  780
LMTIKESVID SVAASIAAEK AIETVEEQSI APDQSKEGLF SMRSSREAVK KSAQAADLIK  840
AAFARSFHHK KESVKIKDEI SEIPADIVTV ASFTNKVSSM NHFTDYLHSA SAALKIQHKY  900
RGWKARKDFL KIRNRIVKIQ AVVRGHQART YYKKVLWSVG IVEKVILRWR RKGPGFRGFC  960
ADKSIGNTLP DNEKIDEYDF LREGRKQKVA GVEKALARVQ SMARYPESRD QYMRLKSSEK  1020
GIENENITAV TNHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein