PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026446395.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 223aa    MW: 26009.3 Da    PI: 5.075
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026446395.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF831.9e-26958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    k+ien++nrqvtfskRrngi+KK +ELS+LCd++vav++fs++g+l  +s
  XP_026446395.1  9 KKIENQTNRQVTFSKRRNGIIKKSYELSTLCDVDVAVLMFSPSGRLSLFS 58
                    68********************************************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MGRTKVEIKK IENQTNRQVT FSKRRNGIIK KSYELSTLCD VDVAVLMFSP SGRLSLFSAK  60
KRIEDILWRF VNLPVHERGQ LKNHEFLLRI LENLEHEEEL LSQASSITNS PANDQPEIVE  120
YLQHEIQRSQ YQIKDLEKQL RVFEGNPTEI TSLLEAEYHE QVLEDALERI CLQKEALQNK  180
FSTGYIESRI DQVYPEPESR TLITRLMTGN NNVTNSNNIF DDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.12e-44MIKC_MADS family protein