PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026446434.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 184aa    MW: 21613 Da    PI: 10.7195
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026446434.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.11.5e-11881241148
                      HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      llv++v+++G + W+ Ia+ +g +R +kqc++rw+++l
   XP_026446434.1  88 LLVRLVQEYGVKKWAFIASLIG-RRIGKQCRERWFNHL 124
                      89********************.*************97 PP
2Myb_DNA-binding48.42.2e-15130172145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      r++WT +E+  lv+a+  +G++ W+ Ia++++ gRt++++k++ +
   XP_026446434.1 130 RDAWTLDEEIALVEAHSAMGNR-WAEIAKRIP-GRTENSIKNHRN 172
                      789*******************.*********.**********65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MDGKRYLRYY MLGNVFVRET FKPHYLQSAA YSLQSGIRYF VYDSKMNQIW QGNKHCTKEA  60
SPEKEQGLAC TMAAAGLACG VRKQKCRLLV RLVQEYGVKK WAFIASLIGR RIGKQCRERW  120
FNHLRPDIKR DAWTLDEEIA LVEAHSAMGN RWAEIAKRIP GRTENSIKNH RNTTWRRQMN  180
KRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.17e-41MYB family protein