PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446446.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 438aa MW: 49063.2 Da PI: 7.9196

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446446.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.4	2.9e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl XP_026446446.1 14 KGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	44	5.2e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_026446446.1 67 RGTFSQQEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 899*****************.*****.*******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG 120 IDPNTHKPLS EVEVNGEEKA PTTTTINNGN NNTHGNKSPG GGFSTNDQMM MKFLKVDNSK 180 QLGLTVQEGS NSMNNIVTPT KDFFLDRPSS SSDTMVGYYP LHQLNYGSAS SPNNQNQSLW 240 FNQDTTRPFD SNSSISAVLP LAPTTSIHPT QLGLKPANSS VTTLDTLHQQ PDSFNLNGVH 300 SYWENGTSST NNSSISSGSS SIELHNNQSS NNHISSNNNN SFWFESEPEE IKWSEYLQNP 360 FLMASAASTQ TSTPPQQPQQ QQPIYNEIIK SETQFMNNDG LSTTSWHHQN PQQQFLQAAT 420 GDIYSKDFQR LAAALGQI

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG  120
IDPNTHKPLS EVEVNGEEKA PTTTTINNGN NNTHGNKSPG GGFSTNDQMM MKFLKVDNSK  180
QLGLTVQEGS NSMNNIVTPT KDFFLDRPSS SSDTMVGYYP LHQLNYGSAS SPNNQNQSLW  240
FNQDTTRPFD SNSSISAVLP LAPTTSIHPT QLGLKPANSS VTTLDTLHQQ PDSFNLNGVH  300
SYWENGTSST NNSSISSGSS SIELHNNQSS NNHISSNNNN SFWFESEPEE IKWSEYLQNP  360
FLMASAASTQ TSTPPQQPQQ QQPIYNEIIK SETQFMNNDG LSTTSWHHQN PQQQFLQAAT  420
GDIYSKDFQR LAAALGQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	4e-91	MYB family protein