PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446682.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

DBB

Protein Properties

Length: 204aa MW: 22805 Da PI: 5.204

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446682.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.9	1.6e-06	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e+ e+ C ++ lC +C ++ H H+++pl XP_026446682.1 4 QCDVCEKAEAVVLCCADEAALCYNCDVKVHAAnklaskHQRIPL 47 7*****************************66889999998886 PP
2	zf-B_box	33.6	7.9e-11	55	95	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38 +++ C+ ++ek +fC +++ llC++C +++H++ H+ XP_026446682.1 55 NQPSCDICQEKAGYFFCLEDRALLCRNCDVSIHSStrssHQ 95 6899*****************************77777887 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MKIQCDVCEK AEAVVLCCAD EAALCYNCDV KVHAANKLAS KHQRIPLLHN NHNRNQPSCD 60 ICQEKAGYFF CLEDRALLCR NCDVSIHSST RSSHQRFLLT GVKLNDFQQQ QQQITDSKPS 120 SLSYLNSSMT PNNANGSSSL NISSTNIDMN SNSTFSDMNN NSTFSSDPHF SDWRSDEIFT 180 NSTNLDQNYE FSPSEFESST ISSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	1e-48	DBB family protein