PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446712.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARF

Protein Properties

Length: 682aa MW: 75827.2 Da PI: 6.1229

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446712.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.7	1.9e-22	129	229	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++ +++a+++ ++++ ++l+ +d++g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + + XP_026446712.1 129 FCKTLTASDTSTHGGFSVLRRHADDClppldmsQHPP--WQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RGE 219 99***************************654444..458********************************************..449 PP EE..EEEEE- CS B3 89 efelvvkvfr 98 ++el+v+v+r XP_026446712.1 220 TGELRVGVRR 229 999***97 PP
2	Auxin_resp	108.8	5.8e-36	255	337	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F+v+Y+Pr+s+seF+v+v+k+++a ++k+svGmRfkm+fe+e+++err+sGt+vgv + + W++S+WrsLk XP_026446712.1 255 ASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEAREQKLSVGMRFKMRFEGEEAPERRFSGTIVGVGENASQWWTDSEWRSLK 337 789******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MALAPANHSS SVDGCNQGSL SDDLYRELWH ACAGPLVTVP REGERVYYFP QGHMEQLEAS 60 TLQPLDKQMP SFNLPSKILC KVVHVQLRAE SETDEVYAQI TLLPESDQGE VTSPDPPLAE 120 PSRCIVHSFC KTLTASDTST HGGFSVLRRH ADDCLPPLDM SQHPPWQELV ATDLHGNEWH 180 FRHIFRGQPR RHLLTTGWSV FVSSKRLVAG DAFIFLRGET GELRVGVRRL MRQLSNMPSS 240 VISSHSMHLG VLATASHAIA TGTLFSVFYK PRTSRSEFIV SVNKYLEARE QKLSVGMRFK 300 MRFEGEEAPE RRFSGTIVGV GENASQWWTD SEWRSLKVQW DEPSSIPRPD RVSPWELEPL 360 VAAAPPTSQP AQRNKRAWPP GLPSPTPDVS VFGMWKSPVE SPSSFSHSEL QRGREMYQSP 420 NSNSPFSPLV KPNSRGFSGN SQLALSSSSM YWSNQTEILT DSFISVPSKE SVEKRQETSN 480 GYRLFGIQLV HNTNMEESSP AVASLPGLGE DQPSLDAESD RQSQPSNANR CGVPALSSDP 540 EKSCLRSPQE MQSRQTRSCT KVHMQGIAVG RAVDLTRLDC YDDLLKKLEG MFSIEGELSG 600 PSKKWQVVYT DDEDDMMMVG DDPWHEFCGM VRKIFIYTVE EVKRLSPKAK LPPVNSDVKS 660 TKTDSDVAVA TTEDQSSVAG QA

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MALAPANHSS SVDGCNQGSL SDDLYRELWH ACAGPLVTVP REGERVYYFP QGHMEQLEAS  60
TLQPLDKQMP SFNLPSKILC KVVHVQLRAE SETDEVYAQI TLLPESDQGE VTSPDPPLAE  120
PSRCIVHSFC KTLTASDTST HGGFSVLRRH ADDCLPPLDM SQHPPWQELV ATDLHGNEWH  180
FRHIFRGQPR RHLLTTGWSV FVSSKRLVAG DAFIFLRGET GELRVGVRRL MRQLSNMPSS  240
VISSHSMHLG VLATASHAIA TGTLFSVFYK PRTSRSEFIV SVNKYLEARE QKLSVGMRFK  300
MRFEGEEAPE RRFSGTIVGV GENASQWWTD SEWRSLKVQW DEPSSIPRPD RVSPWELEPL  360
VAAAPPTSQP AQRNKRAWPP GLPSPTPDVS VFGMWKSPVE SPSSFSHSEL QRGREMYQSP  420
NSNSPFSPLV KPNSRGFSGN SQLALSSSSM YWSNQTEILT DSFISVPSKE SVEKRQETSN  480
GYRLFGIQLV HNTNMEESSP AVASLPGLGE DQPSLDAESD RQSQPSNANR CGVPALSSDP  540
EKSCLRSPQE MQSRQTRSCT KVHMQGIAVG RAVDLTRLDC YDDLLKKLEG MFSIEGELSG  600
PSKKWQVVYT DDEDDMMMVG DDPWHEFCGM VRKIFIYTVE EVKRLSPKAK LPPVNSDVKS  660
TKTDSDVAVA TTEDQSSVAG QA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.1	0.0	ARF family protein