PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446934.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 446aa MW: 51564.4 Da PI: 9.8346

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446934.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	36.1	1.2e-11	15	78	1	70
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHH CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvk 70 ffkv +p +v++++ l++p +f+ +h +++ es +le ++g +W vkl +k+ ++++l++GW++F k XP_026446934.1 15 FFKVVIP-NVTTQH-LRIPSDFM-KHTSNE-ESDRAILEGPTGSQWHVKL--CKTEKGTFLQDGWQDFFK 78 7787744.455555.******.776664.55699**********..**************87 PP
2	B3	50.6	3.5e-16	154	232	2	84
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 + ++ + +v s l p++f +++ + + +++l+++sg+ ++v++ +++gr+++++GW+ Fv++ +Lk gD++vFkl XP_026446934.1 154 KIQMAHVHVILSFVLHTPREFSKKYL--PSADAKIILRNPSGNCFTVNF--INRKGRHYFAGGWRAFVREAQLKKGDICVFKL 232 56677778888888899***9994..234568***********..999999**********************96 PP
3	B3	65.5	7.7e-21	351	440	3	97
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 k++t+ v + +l lp++f +++ ++ +++l+++sg+ ++v+++ ++k++r+++++GW+ Fv++n+L g +++F+l+g+sef v++f XP_026446934.1 351 KKMTQMKVYRGFMLHLPREFSKKYLP--STNAEIILRNPSGKYFTVNFR-NNKGNRHYFSGGWSAFVRENKLSKGSICIFELVGKSEF--SVHIF 440 89999****************953..35569***********4.777778*************************99999..88887 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MARSAQSSPF WSPQFFKVVI PNVTTQHLRI PSDFMKHTSN EESDRAILEG PTGSQWHVKL 60 CKTEKGTFLQ DGWQDFFKFL LIPIKAVIIV EKEHSGTVKP VFIYETGIEA VAEKRIKRED 120 IPMLIPSDSE SQEKTITEDK DAAESFSSIH PYFKIQMAHV HVILSFVLHT PREFSKKYLP 180 SADAKIILRN PSGNCFTVNF INRKGRHYFA GGWRAFVREA QLKKGDICVF KLRIPTEFMK 240 YISNEESERA ILKGPSGSQW HIELCRTEKG TFLQDGWQDF VRYMKLVFIY ETGIEAVAEK 300 RIKREDIPML IPSDSESQEN MTIEDKDAKL KMSAESFTSI HPYFKTELAR KKMTQMKVYR 360 GFMLHLPREF SKKYLPSTNA EIILRNPSGK YFTVNFRNNK GNRHYFSGGW SAFVRENKLS 420 KGSICIFELV GKSEFSVHIF PVAHRN

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MARSAQSSPF WSPQFFKVVI PNVTTQHLRI PSDFMKHTSN EESDRAILEG PTGSQWHVKL  60
CKTEKGTFLQ DGWQDFFKFL LIPIKAVIIV EKEHSGTVKP VFIYETGIEA VAEKRIKRED  120
IPMLIPSDSE SQEKTITEDK DAAESFSSIH PYFKIQMAHV HVILSFVLHT PREFSKKYLP  180
SADAKIILRN PSGNCFTVNF INRKGRHYFA GGWRAFVREA QLKKGDICVF KLRIPTEFMK  240
YISNEESERA ILKGPSGSQW HIELCRTEKG TFLQDGWQDF VRYMKLVFIY ETGIEAVAEK  300
RIKREDIPML IPSDSESQEN MTIEDKDAKL KMSAESFTSI HPYFKTELAR KKMTQMKVYR  360
GFMLHLPREF SKKYLPSTNA EIILRNPSGK YFTVNFRNNK GNRHYFSGGW SAFVRENKLS  420
KGSICIFELV GKSEFSVHIF PVAHRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49480.1	1e-10	B3 family protein