PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026447049.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family Nin-like
Protein Properties Length: 350aa    MW: 40104 Da    PI: 4.9819
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026447049.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK60.43.3e-19246294351
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 
                     k ++l+dl + F+ +i +AAkeL++++T++K +CR++G++RWP+R ++s
  XP_026447049.1 246 KALTLNDLTRWFHVTIVQAAKELQLSPTAIKHKCREFGVERWPSRTVES 294
                     889******************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MRDVTMPGCS YAEEEPLDVA ELFHENNPTL NLDDDMGLED LLNGTLQHDD GNQFDWDTEN  60
PVMNHDNGVE GENPEYVGDM GDEVAPIPVW PPVQTPFNCS YCQVLREIIH QNGANSMKLE  120
IHGRIGVICH AIHETRTNVI NEPPIVNHQM VDFTTQSMDS VKHFIVEYCQ NRTQEGYVLV  180
QDPLWVYYDA LCYGLNWFNN VQPDEPNPPP DNTEAHRPRA EEENQTPDAT TPRPKPDQAT  240
QKRKVKALTL NDLTRWFHVT IVQAAKELQL SPTAIKHKCR EFGVERWPSR TVESYNKKIL  300
ILEKSIREGT SKPNASREME NLRKKLADIY ACLPQRDNVL PAARGRRRTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.15e-13Nin-like family protein