PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026447164.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 251aa    MW: 29904.2 Da    PI: 7.8299
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026447164.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.24.5e-094584345
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     +WT++E    +++ +++G++ W+t a+ +g  + ++++k+ w+
   XP_026447164.1 45 KWTEDEKAFVLKYYEKHGPD-WNTMAEVLG--KNRYHVKDTWR 84
                     8*****************88.***999998..899****9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MVLHSGKHRN VRGCWKEIGA SIPYRPTEAV YQRAHTLFTR DESRKWTEDE KAFVLKYYEK  60
HGPDWNTMAE VLGKNRYHVK DTWRRIYRTG LRKGKWTQEE YQSLFNLVNM DLRMHVCEEK  120
KLKHGMIRDN IGWQAISKSL ATRTDMDCCT KWYKQLSSSM VKEEKWADVD DYWLLDELLR  180
LDACCVEDVD WDNLLEHRPG DITLKRWRQM VNHIGIHGLL SFAEQVEVLA KRYCPELLEV  240
REALDSRPVV D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-93MYB_related family protein