PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026447165.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 661aa MW: 76533 Da PI: 7.7614

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026447165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.9	2.6e-09	455	494	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT++E +++++++G++ Wkt a+ +g + ++++k+ w+ XP_026447165.1 455 KWTEDEKAFVLKYHEKHGPD-WKTMAEVLG--KNRYHVKDIWR 494 8***************88.999998..899***9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
MKRMYCERAK RRRNKDIEAL SASEVPTEEK KKKHKRNKEI EALSSSEVPT EEKNKKKKHR 60 KSEEKESLST PEVPTEKKKK KKHERNKEIE ALSTSEVPTD VGGEKGSEEK EGGSDSGREE 120 SGKRKKKKHK ERVKECNDVE SATDEAASEG KDHIDVSGEE NNEHVKKGKG KKNKRKNENG 180 GDYGESCIEK SDGEAESGSR SSKKRNREEE GLDVDLEEGK KKKKKKKKGT KSDANIGDVE 240 TQNNLGSTNE HLRNSGTKKS SKRVKFSNHV EVFPAADDQD DQEEDAGTEL VQCKRFTREE 300 DQIIKDAVHR YMEIHELGED GLDMILHSEK HPNIRGCWKE IGAALPYRHV NAVCQRAHTL 360 FTREDQDDVE ENPGMELVRG KRFTKEEDQI LRDAVHKYIK IHELGEDGVD MVLHSGKHRN 420 VRGCWKEIGA SIPYRPTEAV CQRAHTLFTR DESRKWTEDE KAFVLKYHEK HGPDWKTMAE 480 VLGKNRYHVK DIWRRIYRTG LRKGKWTQEE YQSLFNLVNM DLRMHVCEEK KLKHGMIRDN 540 IGWQAISKSL ATRTDMDCCT KWYKQLSSSM VKEEKWADVD DYWLLDELLR LDACCVEDVD 600 WDNLLEHRPG DITLKRWRQM VNHIGIHGLL SFAEQVEVLA KRYCPELLEV REALDSRPVV 660 D

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

MKRMYCERAK RRRNKDIEAL SASEVPTEEK KKKHKRNKEI EALSSSEVPT EEKNKKKKHR  60
KSEEKESLST PEVPTEKKKK KKHERNKEIE ALSTSEVPTD VGGEKGSEEK EGGSDSGREE  120
SGKRKKKKHK ERVKECNDVE SATDEAASEG KDHIDVSGEE NNEHVKKGKG KKNKRKNENG  180
GDYGESCIEK SDGEAESGSR SSKKRNREEE GLDVDLEEGK KKKKKKKKGT KSDANIGDVE  240
TQNNLGSTNE HLRNSGTKKS SKRVKFSNHV EVFPAADDQD DQEEDAGTEL VQCKRFTREE  300
DQIIKDAVHR YMEIHELGED GLDMILHSEK HPNIRGCWKE IGAALPYRHV NAVCQRAHTL  360
FTREDQDDVE ENPGMELVRG KRFTKEEDQI LRDAVHKYIK IHELGEDGVD MVLHSGKHRN  420
VRGCWKEIGA SIPYRPTEAV CQRAHTLFTR DESRKWTEDE KAFVLKYHEK HGPDWKTMAE  480
VLGKNRYHVK DIWRRIYRTG LRKGKWTQEE YQSLFNLVNM DLRMHVCEEK KLKHGMIRDN  540
IGWQAISKSL ATRTDMDCCT KWYKQLSSSM VKEEKWADVD DYWLLDELLR LDACCVEDVD  600
WDNLLEHRPG DITLKRWRQM VNHIGIHGLL SFAEQVEVLA KRYCPELLEV REALDSRPVV  660
D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	10	33	KRRRNKDIEALSASEVPTEEKKKK
2	10	35	KRRRNKDIEALSASEVPTEEKKKKHK
3	11	34	KRRRNKDIEALSASEVPTEEKKKK
4	30	58	KKKKHKRNKEIEALSSSEVPTEEKNKKKK
5	55	83	KKKKHKRNKEIEALSSSEVPTEEKNKKKK
6	55	80	KRRRNKDIEALSASEVPTEEKKKKHK
7	123	131	KRKKKKHKE
8	203	226	KRRRNKDIEALSASEVPTEEKKKK
9	220	226	KKKKKKK
10	220	228	KKKKKKKKK
11	220	262	KKKKKKKKKGTKSDANIGDVETQNNLGSTNEHLRNSGTKKSSK
12	221	227	KKKKKKK
13	221	263	KKKKKKKKKGTKSDANIGDVETQNNLGSTNEHLRNSGTKKSSK
14	222	228	KKKKKKK
15	222	264	KKKKKKKKKGTKSDANIGDVETQNNLGSTNEHLRNSGTKKSSK
16	223	265	KKKKKKKKKGTKSDANIGDVETQNNLGSTNEHLRNSGTKKSSK
17	224	266	KKKKKKKKKGTKSDANIGDVETQNNLGSTNEHLRNSGTKKSSK
18	225	267	KKKKKKKKKGTKSDANIGDVETQNNLGSTNEHLRNSGTKKSSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	1e-105	MYB_related family protein