PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026447450.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 251aa    MW: 30048.3 Da    PI: 9.1688
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026447450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.72.3e-074584345
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     +WT++E    ++  +++G++ Wk+ a+ +g  + + ++++ w+
   XP_026447450.1 45 NWTEDEKAVVLKFYEKHGPD-WKSLAQILG--KNRHHVRETWR 84
                     8*****************88.********9..77888988776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MILNCRKHPN IRTCWREIGA ALPYRPYNAV YQRGHILFER SESRNWTEDE KAVVLKFYEK  60
HGPDWKSLAQ ILGKNRHHVR ETWRHTSRTG LKKGNWTQKE YQSLFHLVNK DLRMRMYEEK  120
PSKHGMIRDN ISWQAISDRL TTRTEMRCCK KWYDQLSSSM VKEGKWANTD DYRLLDELLR  180
LDACCVEDVD WDNLLEHRSG YISLKRWRQM VNHIGIHGLQ SFADQVEVLS KRYCPELLEV  240
REALDSRPVV D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.14e-94MYB_related family protein