PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026447766.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 773aa    MW: 85600.7 Da    PI: 6.4117
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026447766.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.32e-21115170156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     r+k +++t+eq++e+e+lF+++++p++++r++L+kklgL  rqVk+WFqNrR++ k
  XP_026447766.1 115 RKKYHRHTAEQIKEMEALFKESPHPDEKQRQQLSKKLGLAPRQVKFWFQNRRTQIK 170
                     7999************************************************9877 PP
2START212.61.4e-662915125206
                     HHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEE CS
           START   5 eaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlev 84 
                     + ++el+k+a+++ep+Wv+s+    e++n+de+ ++f+++ +       +s+e++r+ gvv+ +l++l + ++d++ qW+e+++    ka+t++v
  XP_026447766.1 291 QSMEELIKMATSGEPLWVQSVesgrEILNYDEYKREFSPESSstsarvrRSIEVSREAGVVFVDLPKLIQAFMDVN-QWKEMFPslisKAATVDV 384
                     6899**********************************99889*********************************.****************** PP

                     ECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE- CS
           START  85 issg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdl 172
                     issg      ga qlm+ae+q+l+plvp R+++f+Ry++ql+ ++w+ivdvS+d+ ++   ++s+v+ +++pSg++ie+k+ngh+kv w+eh + 
  XP_026447766.1 385 ISSGeganknGAAQLMFAEFQMLTPLVPtREVYFIRYCKQLSPERWAIVDVSIDNVEDTI-DASLVKFRKRPSGCIIEDKANGHCKVMWIEHLEI 478
                     **********************************************************87.9********************************* PP

                     -SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 173 kgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++ ++h+l+rs+v+sg+a+gak+w++tlq qce+
  XP_026447766.1 479 QKTTIHSLFRSTVNSGVAFGAKRWMSTLQLQCER 512
                     ********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 773 aa     Download sequence    
MGLVNMSSNP PATHTKDFFA SPALSLTLAG IFRHAGGSGR GPGSMEVEEG DEESGGGYGG  60
GKSHHNHQQE DMLEISSENT GPCRTDDDDM GMDRLHDEEG DEEDNNNNNK SKKKRKKYHR  120
HTAEQIKEME ALFKESPHPD EKQRQQLSKK LGLAPRQVKF WFQNRRTQIK AIQERHENSL  180
LKSEMDKLQE ENRVMRETIK KSCCPNCGFA TTSKDSATLS TEEQQLRIEN ARLKAEVDKL  240
RSTARKFATG ATSPTSSGSA GNNGQENRST LDYYTGIFGI DKSRIFDMVN QSMEELIKMA  300
TSGEPLWVQS VESGREILNY DEYKREFSPE SSSTSARVRR SIEVSREAGV VFVDLPKLIQ  360
AFMDVNQWKE MFPSLISKAA TVDVISSGEG ANKNGAAQLM FAEFQMLTPL VPTREVYFIR  420
YCKQLSPERW AIVDVSIDNV EDTIDASLVK FRKRPSGCII EDKANGHCKV MWIEHLEIQK  480
TTIHSLFRST VNSGVAFGAK RWMSTLQLQC ERLVFGMATN VPTKDSSGVA TLAGRKSVLK  540
LAQRMTSSFC RDIGASSHNT WTKIVTKAGD DIRIASRKNL NDPGEPLGVI VCAVSSTWVP  600
VAPNVLFDFL RDDARRMEWD IMSMGGPVQS IANLAKGQDR GNTVTIQASK SKDSSTWILQ  660
DCCTNGFESM IVYASVDIPE LQSAMTGCDS SKVAILPSGF SILSDGLETR PLVISSRLEE  720
KTVEGAGSLF TMVFQILANS TPTAKLTMES LETVNTLVAC TLQNIKKGLD CED
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113117KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein