PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026448245.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GeBP

Protein Properties

Length: 454aa MW: 50534.6 Da PI: 4.1337

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026448245.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	107.3	1.2e-33	221	315	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 lf r+ws++Deiv+L G++d+ +++g++p++d+ +f e +k+s+s++v+k+ql++K+rrLKkK++++ k+ k g++p+fsk+hd ++e+ k iW XP_026448245.1 221 LFARVWSDDDEIVVLEGMLDW-HRRGVDPFADLGGFLESIKESVSATVNKDQLLNKMRRLKKKYQNNYKRGKAGQDPTFSKPHDLRCYEVMKLIW 314 799****************.889******************************************************************** PP DUF573 97 g 97 + XP_026448245.1 315 E 315 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MAQKKPLLED PPAASSSDEE VESGEEEEEE EVESGEEEEA AGGEGQEEEE EEDEEEEEGE 60 SESDDQEVAP KKPEPVSKPE SASSSEEEEG EEEEEEEEEE EEEEEEEEEE EEEDSDEEGS 120 GKDESESDEI PKKSNPAEVL RSPSKPSVGD EPKPKKTVSK PPSSTAPAIA VVPISQKRPA 180 ESNRAEIDIE KKKKKNDEEN GGGSSSHPEG EKDPEKDPKK LFARVWSDDD EIVVLEGMLD 240 WHRRGVDPFA DLGGFLESIK ESVSATVNKD QLLNKMRRLK KKYQNNYKRG KAGQDPTFSK 300 PHDLRCYEVM KLIWEGEEVS GRKRSAPADA TSNGNDESAP ATNGKKSRSS KTKTTPKTVA 360 LSDISSKELP REVQNGMSAY PFLLEAFREN KNGPTLGESL LTEGLALLGD SIAKEWEKKW 420 RKFNEEEAEV YLKRVDLVRE LTTEVLKAVK SSDS

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MAQKKPLLED PPAASSSDEE VESGEEEEEE EVESGEEEEA AGGEGQEEEE EEDEEEEEGE  60
SESDDQEVAP KKPEPVSKPE SASSSEEEEG EEEEEEEEEE EEEEEEEEEE EEEDSDEEGS  120
GKDESESDEI PKKSNPAEVL RSPSKPSVGD EPKPKKTVSK PPSSTAPAIA VVPISQKRPA  180
ESNRAEIDIE KKKKKNDEEN GGGSSSHPEG EKDPEKDPKK LFARVWSDDD EIVVLEGMLD  240
WHRRGVDPFA DLGGFLESIK ESVSATVNKD QLLNKMRRLK KKYQNNYKRG KAGQDPTFSK  300
PHDLRCYEVM KLIWEGEEVS GRKRSAPADA TSNGNDESAP ATNGKKSRSS KTKTTPKTVA  360
LSDISSKELP REVQNGMSAY PFLLEAFREN KNGPTLGESL LTEGLALLGD SIAKEWEKKW  420
RKFNEEEAEV YLKRVDLVRE LTTEVLKAVK SSDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G11510.1	1e-22	GeBP family protein