PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026448335.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 793aa    MW: 86855.1 Da    PI: 6.1232
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026448335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.71.1e-19117173157
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL ++lgL+  qVk+WFqN+R+++k+
  XP_026448335.1 117 KKRYHRHTQHQIQEMESFFKECPHPDDKQRKELGRELGLEPLQVKFWFQNKRTQMKN 173
                     678899************************************************995 PP
2START204.63.9e-643115321206
                     HHHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                     ela +a++elv++ +++ep Wv+ +     e +n++e+ ++f+++ +     +++ea+r+s++v+m++++lve+l+d + qW + +     +a +
  XP_026448335.1 311 ELAVAAMEELVQLSQLGEPIWVQRVngestETLNEEEYARTFPRGIGskpfgFKTEASRDSALVIMNCMNLVESLMDAN-QWMNLFSgivsRAVI 404
                     57899***************************************999********************************.*****999999**** PP

                     EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE- CS
           START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwveh 169
                     le +s+g      galqlm+ e+q+ splvp R+++fvRy++q+g+ +w++vdvS+d+ ++++     +R +++pSg++i++++ng+skvtwveh
  XP_026448335.1 405 LEILSTGvagnsnGALQLMTGEFQVASPLVPtRESLFVRYCKQQGESTWAVVDVSLDHLRSNNP----IRFRRRPSGCIIQDMPNGYSKVTWVEH 495
                     *************************************************************997....*************************** PP

                     EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 170 vdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     v++++r +h+l+r+lv+s++a+gak+w+a l+rqce+
  XP_026448335.1 496 VEVDDRAVHELYRPLVNSTIAFGAKRWLAVLDRQCER 532
                     ***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 793 aa     Download sequence    
MPAGIMLPAR HVPPTMGNGN RNGNVPEFGS SSSGLTLGQQ TNMMDAHHLL LHHQHSLLNN  60
PLDMMNQTTP ESNDLQAARI RAGDEEFDSK SGGSDNLEGT GGGSGDEQLD QNQRKRKKRY  120
HRHTQHQIQE MESFFKECPH PDDKQRKELG RELGLEPLQV KFWFQNKRTQ MKNQHERHEN  180
NQLRAENDKL RAENIRYKEA LSTASCPNCG GPTALGEMSF DEHHLRMENV RLREEIDKIS  240
GIAAKYVGKP MMPYPISSPL LPPRMLDLGV GHLGIHSHSG SAGGEIFGSS DDLMRSLASG  300
HTDLDKSVVV ELAVAAMEEL VQLSQLGEPI WVQRVNGEST ETLNEEEYAR TFPRGIGSKP  360
FGFKTEASRD SALVIMNCMN LVESLMDANQ WMNLFSGIVS RAVILEILST GVAGNSNGAL  420
QLMTGEFQVA SPLVPTRESL FVRYCKQQGE STWAVVDVSL DHLRSNNPIR FRRRPSGCII  480
QDMPNGYSKV TWVEHVEVDD RAVHELYRPL VNSTIAFGAK RWLAVLDRQC ERLASAMASN  540
IPAGEIGVIT TPDGRKMMLK LAERMATSFC AGVGASSSHT WTIISGNGAD DVRVMTRKSV  600
DDPGRPPGIV LNAATSFWIP VPPKRIFDFL RHENSRSEWD ILSNGGIVEE IAHIANGRDP  660
GNCVSLLRVN QSTNSSQSNM LILQESCTEA TGSFVIYAPV DIPSMNDVIN GGNPDNVALL  720
PSGFAILPDG PITHHGDGQV EYGQGGSLLT VAFQILVDSV PTAKLALGSV ATVNSLITCT  780
VDRIKAAVTD ENA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114118RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein