PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026448339.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 791aa    MW: 86598.8 Da    PI: 6.1232
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026448339.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.71.1e-19116172157
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL ++lgL+  qVk+WFqN+R+++k+
  XP_026448339.1 116 KKRYHRHTQHQIQEMESFFKECPHPDDKQRKELGRELGLEPLQVKFWFQNKRTQMKN 172
                     678899************************************************995 PP
2START204.63.9e-643105311206
                     HHHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                     ela +a++elv++ +++ep Wv+ +     e +n++e+ ++f+++ +     +++ea+r+s++v+m++++lve+l+d + qW + +     +a +
  XP_026448339.1 310 ELAVAAMEELVQLSQLGEPIWVQRVngestETLNEEEYARTFPRGIGskpfgFKTEASRDSALVIMNCMNLVESLMDAN-QWMNLFSgivsRAVI 403
                     57899***************************************999********************************.*****999999**** PP

                     EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE- CS
           START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwveh 169
                     le +s+g      galqlm+ e+q+ splvp R+++fvRy++q+g+ +w++vdvS+d+ ++++     +R +++pSg++i++++ng+skvtwveh
  XP_026448339.1 404 LEILSTGvagnsnGALQLMTGEFQVASPLVPtRESLFVRYCKQQGESTWAVVDVSLDHLRSNNP----IRFRRRPSGCIIQDMPNGYSKVTWVEH 494
                     *************************************************************997....*************************** PP

                     EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 170 vdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     v++++r +h+l+r+lv+s++a+gak+w+a l+rqce+
  XP_026448339.1 495 VEVDDRAVHELYRPLVNSTIAFGAKRWLAVLDRQCER 531
                     ***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 791 aa     Download sequence    
MPAGIMLPAR HVPPTMGNGN RNGNVPEFGS SSSGLTLGQT NMMDAHHLLL HHQHSLLNNP  60
LDMMNQTTPE SNDLQAARIR AGDEEFDSKS GGSDNLEGTG GGSGDEQLDQ NQRKRKKRYH  120
RHTQHQIQEM ESFFKECPHP DDKQRKELGR ELGLEPLQVK FWFQNKRTQM KNQHERHENN  180
QLRAENDKLR AENIRYKEAL STASCPNCGG PTALGEMSFD EHHLRMENVR LREEIDKISG  240
IAAKYVGKPM MPYPISSPLL PPRMLDLGVG HLGIHSHSGS AGGEIFGSSD DLMRSLASGH  300
TDLDKSVVVE LAVAAMEELV QLSQLGEPIW VQRVNGESTE TLNEEEYART FPRGIGSKPF  360
GFKTEASRDS ALVIMNCMNL VESLMDANQW MNLFSGIVSR AVILEILSTG VAGNSNGALQ  420
LMTGEFQVAS PLVPTRESLF VRYCKQQGES TWAVVDVSLD HLRSNNPIRF RRRPSGCIIQ  480
DMPNGYSKVT WVEHVEVDDR AVHELYRPLV NSTIAFGAKR WLAVLDRQCE RLASAMASNI  540
PAGEIGVITT PDGRKMMLKL AERMATSFCA GVGASSSHTW TIISGNGADD VRVMTRKSVD  600
DPGRPPGIVL NAATSFWIPV PPKRIFDFLR HENSRSEWDI LSNGGIVEEI AHIANGRDPG  660
NCVSLLRVNS TNSSQSNMLI LQESCTEATG SFVIYAPVDI PSMNDVINGG NPDNVALLPS  720
GFAILPDGPI THHGDGQVEY GQGGSLLTVA FQILVDSVPT AKLALGSVAT VNSLITCTVD  780
RIKAAVTDEN A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113117RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein