PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026448340.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 757aa    MW: 83338.1 Da    PI: 6.0508
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026448340.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.81.1e-1981137157
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL ++lgL+  qVk+WFqN+R+++k+
  XP_026448340.1  81 KKRYHRHTQHQIQEMESFFKECPHPDDKQRKELGRELGLEPLQVKFWFQNKRTQMKN 137
                     678899************************************************995 PP
2START204.83.6e-642754961206
                     HHHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                     ela +a++elv++ +++ep Wv+ +     e +n++e+ ++f+++ +     +++ea+r+s++v+m++++lve+l+d + qW + +     +a +
  XP_026448340.1 275 ELAVAAMEELVQLSQLGEPIWVQRVngestETLNEEEYARTFPRGIGskpfgFKTEASRDSALVIMNCMNLVESLMDAN-QWMNLFSgivsRAVI 368
                     57899***************************************999********************************.*****999999**** PP

                     EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE- CS
           START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwveh 169
                     le +s+g      galqlm+ e+q+ splvp R+++fvRy++q+g+ +w++vdvS+d+ ++++     +R +++pSg++i++++ng+skvtwveh
  XP_026448340.1 369 LEILSTGvagnsnGALQLMTGEFQVASPLVPtRESLFVRYCKQQGESTWAVVDVSLDHLRSNNP----IRFRRRPSGCIIQDMPNGYSKVTWVEH 459
                     *************************************************************997....*************************** PP

                     EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 170 vdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     v++++r +h+l+r+lv+s++a+gak+w+a l+rqce+
  XP_026448340.1 460 VEVDDRAVHELYRPLVNSTIAFGAKRWLAVLDRQCER 496
                     ***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 757 aa     Download sequence    
MFHQTNMMDA HHLLLHHQHS LLNNPLDMMN QTTPESNDLQ AARIRAGDEE FDSKSGGSDN  60
LEGTGGGSGD EQLDQNQRKR KKRYHRHTQH QIQEMESFFK ECPHPDDKQR KELGRELGLE  120
PLQVKFWFQN KRTQMKNQHE RHENNQLRAE NDKLRAENIR YKEALSTASC PNCGGPTALG  180
EMSFDEHHLR MENVRLREEI DKISGIAAKY VGKPMMPYPI SSPLLPPRML DLGVGHLGIH  240
SHSGSAGGEI FGSSDDLMRS LASGHTDLDK SVVVELAVAA MEELVQLSQL GEPIWVQRVN  300
GESTETLNEE EYARTFPRGI GSKPFGFKTE ASRDSALVIM NCMNLVESLM DANQWMNLFS  360
GIVSRAVILE ILSTGVAGNS NGALQLMTGE FQVASPLVPT RESLFVRYCK QQGESTWAVV  420
DVSLDHLRSN NPIRFRRRPS GCIIQDMPNG YSKVTWVEHV EVDDRAVHEL YRPLVNSTIA  480
FGAKRWLAVL DRQCERLASA MASNIPAGEI GVITTPDGRK MMLKLAERMA TSFCAGVGAS  540
SSHTWTIISG NGADDVRVMT RKSVDDPGRP PGIVLNAATS FWIPVPPKRI FDFLRHENSR  600
SEWDILSNGG IVEEIAHIAN GRDPGNCVSL LRVNQSTNSS QSNMLILQES CTEATGSFVI  660
YAPVDIPSMN DVINGGNPDN VALLPSGFAI LPDGPITHHG DGQVEYGQGG SLLTVAFQIL  720
VDSVPTAKLA LGSVATVNSL ITCTVDRIKA AVTDENA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17882RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein