PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026448402.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 252aa    MW: 29146.7 Da    PI: 5.9458
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026448402.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.71.5e-2674165191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fY++Y+ ++GF++r+++ ++s+++++++ r+fvCs+eg+r++++ + +++     +r+ tr gC+a+l+v  ++ +kw+v+ ++++HnH+l+p
  XP_026448402.1  74 EFYDKYSVRMGFTIRNTRIRRSHKDNSVIGREFVCSREGFRAKKHLNrENR--IlpPRPITREGCNAMLRVAVKNGSKWVVSGFVKDHNHDLNP 165
                     6******************************************99982333..2459**********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MASTSVLCKN DGSGWEVEMS DDCELIKDEI LDTLNPSSNG NNDYDTVELP IEATESNVEP  60
CIGMEFETSE DAREFYDKYS VRMGFTIRNT RIRRSHKDNS VIGREFVCSR EGFRAKKHLN  120
RENRILPPRP ITREGCNAML RVAVKNGSKW VVSGFVKDHN HDLNPTKVPP RRFHRSVFSE  180
DEKDKKIREL STELQRERRR CASYQEQLRL ILKDIEEHTQ HLSLAVESMV TNVRELESDE  240
LDCSQGNNQI IK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.16e-54FAR1 family protein