PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026448441.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HB-other

Protein Properties

Length: 1829aa MW: 203891 Da PI: 5.0148

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026448441.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56	6.9e-18	31	87	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++kR t+ qle Le+ ++ + yps++ r+eL++kl+L++rq ++WF+ rR k++k XP_026448441.1 31 KSKRKMKTPMQLELLEKTYAVEAYPSEAIRQELSAKLDLSDRQLQMWFCHRRLKDRK 87 679****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1829 aa Download sequence
MMMDSTPDGE RKKPPEGTSG GGGGGGGGES KSKRKMKTPM QLELLEKTYA VEAYPSEAIR 60 QELSAKLDLS DRQLQMWFCH RRLKDRKVAP EKKPRKDNMQ LTASTSGQGL DEMMMGGGDQ 120 GNDPGSGSGS GSSQYEHRKV GGSGGRTTVS RGIADTTVAM SRRYHETPQD ISELRAIAFV 180 ESQLGEALRE DGPILGMEFD PLPPGAFGAP IVVQQKQAGR PYDGKMYDRH DTKSIKTPSV 240 LPGSSGGKRK LASGNAHMVH PQSAPRALQE YQFLPEQPSV RSDTYERADP SHFYSSQHDG 300 HSGRASSLSA GGSHLHGKEQ VPTGYGQGTS ASLQSQQGRH SHVLGEYDRM DVQVGLENPL 360 LSCDRRMSNE DEAARLERKR KSDEARIARE VEAHEKRIRK ELEKQDILRR KREEQMRREM 420 EKHDRERRKE EERLMREKLR EEERFQREQK RELERRERFM QKENLRAEKM RQKEEQRREK 480 ETARQKAANE RATARRIAKE SMELIEDERL ELMELAASSK GLPSIISLDS DTLENLDLFK 540 DMLVTFPPKS VQLSRPFAVQ PWKDSEENVG NLLMVWRFLI TFADILELWP FTLDEFVQAF 600 HDYDPRLLGE IHVALLRSIV KDIEDVARTP SMGLGANQNS SANPGGGHPQ IVEGAYAWGF 660 DIRSWQQHLN PLTWPEVLRQ FALSAGFGPQ LKKRSLEQSF FRDDNEGHDC EDIVSTLRNG 720 AAAVSAAAVM QEKGLSQPRR SRHRLTPGTV KFAAFHVLSL EGSKGLSILE VADKIQKSGL 780 RDLTTSKTPE ASIAAALSRD SHLFERTAPS TYCVRAAFRK DPIDADAILS AAREKIQIFA 840 NGLSDSEEAG KDVEDVDDDS ECDVAEDPEV DDIDMTSNQK EDHHLASVIT DKSVACLKVG 900 KRENAGKEVG EILQSGHGSA PGSSLKSFPL EGSQEIGTGA LTDQSADLAR NSNGASTNDL 960 EDAEIDESNT GEPWVQGLME GEYADLTVEE RLNALVALIG VAIEGNSVRV ILEERLEAAN 1020 ALKKQMWAEA QLDKRRMKEE YITKPQSLSF MGTKTELNVM SSVVDGSQSP FGDSKNNEAS 1080 LNPSLKEEPI FDPSNAQIYL NNMSAECNVT PENYQQQHAY AAAEKSRSQY KSYIGQRAEE 1140 MYVYRSLPLG QDRKRNRYWQ FVTSATRNDP GTGRIFYESQ GGCWRLIDTE EAFDILLSSL 1200 DIRGIRESHL HSMLQKIEVS FKDAVRRNSK CRNHVDPVED RVKTEVSEIV SSPDRSAGTE 1260 SPSSTVCAVG SDTVLQSSSF KIDLGRNETE KTDALKRYQD SQRWMWKECF NPSTMCAIKY 1320 GKKRCSELLV TCDFCLDSYF PKDNRCPVCH RIFGNLSNSS KSSDSVNQCE EKPRLESDWH 1380 IRGLETSLPL RIRLLKAQLA ITEVSVSPEA IQPLWTEDSR NSWGLKLQSS SSAEDLLQIL 1440 TLLEGAIKRD CLSSSFETTK ELLGNFAPTV RAADGFSSGS VPILPWVPQT TAAVALRLLE 1500 LDASITYMLQ QKAESQEDKE SGDFIKLPSK YTVIKNIQEA EPAVTPEPAV FLQEENWFDM 1560 GSGRSTSGRG QMIRGKGRGR SAGGRLPRGS TGMRIDSGRL SAGKGEKMVA IQGLGKKSQT 1620 ARGKGGRKRG KRTAKSRQKS SAAVKKRVVI KDMGLGGFSG QFGNSIVIPK QNNYRESPRS 1680 SGGEDEGGWE EDTRRLHDVH VQMDRDDISV EEASGESDDN GLGEYDVRRT DYSGMYNGKS 1740 VDLLESDAED EDEYVDDLRI GDEEDEEDLE EVEGDGYGED DVDMEERYRV HGVGTNRNVQ 1800 EIEEDDEDED EENVDADEAM ETDSSDYSE

Sequence ? help Back to Top

Protein Sequence Length: 1829 aa Download sequence

MMMDSTPDGE RKKPPEGTSG GGGGGGGGES KSKRKMKTPM QLELLEKTYA VEAYPSEAIR  60
QELSAKLDLS DRQLQMWFCH RRLKDRKVAP EKKPRKDNMQ LTASTSGQGL DEMMMGGGDQ  120
GNDPGSGSGS GSSQYEHRKV GGSGGRTTVS RGIADTTVAM SRRYHETPQD ISELRAIAFV  180
ESQLGEALRE DGPILGMEFD PLPPGAFGAP IVVQQKQAGR PYDGKMYDRH DTKSIKTPSV  240
LPGSSGGKRK LASGNAHMVH PQSAPRALQE YQFLPEQPSV RSDTYERADP SHFYSSQHDG  300
HSGRASSLSA GGSHLHGKEQ VPTGYGQGTS ASLQSQQGRH SHVLGEYDRM DVQVGLENPL  360
LSCDRRMSNE DEAARLERKR KSDEARIARE VEAHEKRIRK ELEKQDILRR KREEQMRREM  420
EKHDRERRKE EERLMREKLR EEERFQREQK RELERRERFM QKENLRAEKM RQKEEQRREK  480
ETARQKAANE RATARRIAKE SMELIEDERL ELMELAASSK GLPSIISLDS DTLENLDLFK  540
DMLVTFPPKS VQLSRPFAVQ PWKDSEENVG NLLMVWRFLI TFADILELWP FTLDEFVQAF  600
HDYDPRLLGE IHVALLRSIV KDIEDVARTP SMGLGANQNS SANPGGGHPQ IVEGAYAWGF  660
DIRSWQQHLN PLTWPEVLRQ FALSAGFGPQ LKKRSLEQSF FRDDNEGHDC EDIVSTLRNG  720
AAAVSAAAVM QEKGLSQPRR SRHRLTPGTV KFAAFHVLSL EGSKGLSILE VADKIQKSGL  780
RDLTTSKTPE ASIAAALSRD SHLFERTAPS TYCVRAAFRK DPIDADAILS AAREKIQIFA  840
NGLSDSEEAG KDVEDVDDDS ECDVAEDPEV DDIDMTSNQK EDHHLASVIT DKSVACLKVG  900
KRENAGKEVG EILQSGHGSA PGSSLKSFPL EGSQEIGTGA LTDQSADLAR NSNGASTNDL  960
EDAEIDESNT GEPWVQGLME GEYADLTVEE RLNALVALIG VAIEGNSVRV ILEERLEAAN  1020
ALKKQMWAEA QLDKRRMKEE YITKPQSLSF MGTKTELNVM SSVVDGSQSP FGDSKNNEAS  1080
LNPSLKEEPI FDPSNAQIYL NNMSAECNVT PENYQQQHAY AAAEKSRSQY KSYIGQRAEE  1140
MYVYRSLPLG QDRKRNRYWQ FVTSATRNDP GTGRIFYESQ GGCWRLIDTE EAFDILLSSL  1200
DIRGIRESHL HSMLQKIEVS FKDAVRRNSK CRNHVDPVED RVKTEVSEIV SSPDRSAGTE  1260
SPSSTVCAVG SDTVLQSSSF KIDLGRNETE KTDALKRYQD SQRWMWKECF NPSTMCAIKY  1320
GKKRCSELLV TCDFCLDSYF PKDNRCPVCH RIFGNLSNSS KSSDSVNQCE EKPRLESDWH  1380
IRGLETSLPL RIRLLKAQLA ITEVSVSPEA IQPLWTEDSR NSWGLKLQSS SSAEDLLQIL  1440
TLLEGAIKRD CLSSSFETTK ELLGNFAPTV RAADGFSSGS VPILPWVPQT TAAVALRLLE  1500
LDASITYMLQ QKAESQEDKE SGDFIKLPSK YTVIKNIQEA EPAVTPEPAV FLQEENWFDM  1560
GSGRSTSGRG QMIRGKGRGR SAGGRLPRGS TGMRIDSGRL SAGKGEKMVA IQGLGKKSQT  1620
ARGKGGRKRG KRTAKSRQKS SAAVKKRVVI KDMGLGGFSG QFGNSIVIPK QNNYRESPRS  1680
SGGEDEGGWE EDTRRLHDVH VQMDRDDISV EEASGESDDN GLGEYDVRRT DYSGMYNGKS  1740
VDLLESDAED EDEYVDDLRI GDEEDEEDLE EVEGDGYGED DVDMEERYRV HGVGTNRNVQ  1800
EIEEDDEDED EENVDADEAM ETDSSDYSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	11	37	RKKPPEGTSGGGGGGGGGESKSKRKMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein