PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026448462.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 187aa MW: 21143.5 Da PI: 9.6524

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026448462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.3	8.1e-42	67	143	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqve+C+adl++ak+yhrrhkvCe+hska+vv ++gl+qrfCqqCsrfhe+sefDe+krsCrrrLa+hn+rrrk+++ XP_026448462.1 67 CQVEKCKADLTDAKTYHRRHKVCEFHSKASVVPLAGLHQRFCQQCSRFHEVSEFDETKRSCRRRLAGHNDRRRKSSS 143 **************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MDSKKHNDGF KTKEGFTQKT AKDLLVEDDD EEVGLGLGCT SDKKRKGKRS CSNEGIGVSS 60 SSPSPFCQVE KCKADLTDAK TYHRRHKVCE FHSKASVVPL AGLHQRFCQQ CSRFHEVSEF 120 DETKRSCRRR LAGHNDRRRK SSSESHGEVS SQQGKNPQLE ENHCRRTGET KKVQITHPGN 180 AKHFQSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	43	73	KKRKGKRSCSNEGIGVSSSSPSPFCQVEKCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33810.1	1e-39	SBP family protein