PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026448687.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 266aa MW: 30506.9 Da PI: 6.2595

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026448687.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44	5.3e-14	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W +eEd++l+++++ G g W+t++++ g+ R++k+c+ rw ++l XP_026448687.1 13 RGAWKPEEDLILKRYIEANGEGKWTTVSKKSGLMRSAKSCRMRWKNHL 60 89********************************************97 PP
2	Myb_DNA-binding	49.3	1.1e-15	69	111	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +++E++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_026448687.1 69 ISEDEEDLIIRMHKLLGNR-WSLIAGRIP-GRTDNEVKNYWNTHL 111 699**************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MKKQVCTNEE FKRGAWKPEE DLILKRYIEA NGEGKWTTVS KKSGLMRSAK SCRMRWKNHL 60 RPNIKHGQIS EDEEDLIIRM HKLLGNRWSL IAGRIPGRTD NEVKNYWNTH LSKRNLNHQG 120 QSMNSVTFNC KKRRSMVSDT NDTQQTISIV STKQQDESNI FNGSDERVDA QLSNPSSTTS 180 TSSGAEEVNA VQRYATSTTL DNSAAGDIAK IISEEEIYSC WLSDEPTFYV PFVPSLDYSI 240 LPFDSLDNNY EDCWTNKLRL HDLEED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	4e-56	MYB family protein