PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026448794.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 772aa    MW: 85410.6 Da    PI: 6.5777
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026448794.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.32e-21115170156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     r+k +++t+eq++e+e+lF+++++p++++r++L+kklgL  rqVk+WFqNrR++ k
  XP_026448794.1 115 RKKYHRHTAEQIKEMEALFKESPHPDEKQRQQLSKKLGLAPRQVKFWFQNRRTQIK 170
                     7999************************************************9877 PP
2START215.81.5e-672895114206
                     HHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   4 eeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.......dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     ++ ++el+k+a+++ep+Wv+s+    e++n+de+ ++f+++ +       +s+e++r+ gvv+ +l++l + ++d++ qW+e+++    ka+t++
  XP_026448794.1 289 NQSMEELIKMATVGEPLWVQSVesgrEILNYDEYKREFSPESSstsarvrRSIEVSREAGVVFVDLPRLIQAFMDVN-QWKEMFPslisKAATVD 382
                     6789***********************************99889*********************************.***************** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     vissg      ga qlm+ae+q+l+plvp R+++f+Ry++ql+ ++w+ivdvS+d+ ++   ++s+v+++++pSg++ie+k+ngh+kv w+eh +
  XP_026448794.1 383 VISSGeganknGAAQLMFAEFQMLTPLVPtREVYFIRYCKQLSPERWAIVDVSIDNVEDTI-DASLVKCRKRPSGCIIEDKANGHCKVMWIEHLE 476
                     ***********************************************************87.9******************************** PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                      ++ ++h+l+rs v+sg+a+gak+w++tlq qce+
  XP_026448794.1 477 IQKTTIHSLFRSNVNSGVAFGAKRWMSTLQLQCER 511
                     *********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 772 aa     Download sequence    
MGLVNMSSNP PATRTKDFFA SPALSLTLAG IFRHAGGSGR GPGSMEVEEG DEESGGGYGG  60
GKSHHNHQQD DMLEISSENT GPCRTDDDDM GMDRLHDDEG DEEDNNNNNK SKKKRKKYHR  120
HTAEQIKEME ALFKESPHPD EKQRQQLSKK LGLAPRQVKF WFQNRRTQIK AIQERHENSL  180
LKSEMDKLQE ENRVMRETIK KSCCPNCGFA TTSKDSATLS TEEQQLRIEN ARLKAEVDKL  240
RSTARKFATG ATSPTSSGSA GNGQENRSTL DYYTGIFGID KSRIFDIVNQ SMEELIKMAT  300
VGEPLWVQSV ESGREILNYD EYKREFSPES SSTSARVRRS IEVSREAGVV FVDLPRLIQA  360
FMDVNQWKEM FPSLISKAAT VDVISSGEGA NKNGAAQLMF AEFQMLTPLV PTREVYFIRY  420
CKQLSPERWA IVDVSIDNVE DTIDASLVKC RKRPSGCIIE DKANGHCKVM WIEHLEIQKT  480
TIHSLFRSNV NSGVAFGAKR WMSTLQLQCE RLVFGMATNV PTKDSSGVAT LAGRKSVLKL  540
AQRMTSSFCR GIGASSHNTW TKIVTKAGDD IRIASRKNLN DPGEPLGVIV CAVSSTWVPV  600
APNVLFDFLR DDARRMEWDI MSMGGPVQSI ANLAKGQDRG NTVTIQASKS KDSSTWILQD  660
CCTNGFESMI VYASVDIPEL QSAMTGCDSS KVAILPSGFS ILSDGLETRP LVISSRLEEK  720
TVEGAGSLFT MVFQILANST PTAKLTMESL ETVNTLVACT LQNIKKGLDC ED
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113117KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein