PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026449424.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 1181aa MW: 132122 Da PI: 9.5608

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026449424.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.7	2.6e-08	47	82	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE +++++a +++ ++ Wk++a + +R+ +++ XP_026449424.1 47 QWSKEELKRFYEAYRKYEKD-WKKVAGVVR-NRSTEMV 82 6***************99.*****.99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 1181 aa Download sequence
MATRKSRSIS NKRFGKLNEE SPDKDGGSGG NKSRQRKRKL TDMLGPQWSK EELKRFYEAY 60 RKYEKDWKKV AGVVRNRSTE MVEALYHMNR AYLSLPEGTA SVAGLIAMMT DHYCIMDGSE 120 SDRESDDAPG VSQKPAKRAR GKYHVNGSRG TDADVPDLLK FPPLSSNNGC FSVKKKRTNG 180 GRRAVGKRTP RYPVSHEREK FVTPNKRGLK SDLDAHDEEV AHGAALTLAE ALQRGGSPQV 240 SHTPKRRSEH LRPSSSRKSE RRRQLDWDKS STKHRGITDE NYLEDSLGSR EAENGDFYRN 300 SIYMMDARGV GTVGVQKKGK KSLGRKPKDI ENCHRDEDRE ACSGTEEGLN LSYVKEQAED 360 EVTDSRYVRP RKKNKELKED EKQALDGLTF LANMSLELEP AAVDESESSV QFKGERGRGS 420 RGNVDNFSRH ETFSTIRQRD KSNFSGVKEK SLREVEVTTL RSAKSIKGSS FDVNSLTEEK 480 KPPSQTTIKG QKLKRKHFAA KMQSPTNESH SDLLPDERQQ IEALEENVKK STMKAKRVAA 540 AAVIAKQGKS FRPPELTSSS TDLVRPGTDA ALSTEQVPTP NQVFLPTKHE SRRKMNLQKS 600 LIRRVSNFSE DMGSKRPGKH TSQDGTLDIK DKLSRCLSSP MLRRWCAFEW FYSAIDYPWF 660 AKKEFVEYLN HVGLGHVPRL TRVEWGVIRS SLGKPRRLSQ QFLREEKEKL EQYRESVRTH 720 YTELRNGTRD GLPTDLARPL SVGQRVIACH PRTREFHDGS VLTVDRNRCR IQFDRPELGV 780 EFVMDIDCMP LNAFENMPEA LRRQNIAAGR LSENLNDPKL NNQSKDRTTG GYNSIAPSAK 840 LETADVSSQL SSPIYPMNTL IKKAEGDTVS DIAEAKAAAN ELKAAYTQPC TLAQIQAREA 900 DIRALSELSR ALEKKEALVS ELSRMNDEVH ENQINGDNSL KDHDPFKKQY ATVLIQLKEA 960 NDQVSSALIY LRKRNTYQGN SPPWQTSKPG SGVPVGPFNS IDASAFLPQE AASHVVGILE 1020 SSRVKAQTMV DVAVQALLSC KDGEDAFGSI GDALDSASTH QNGTEVRSFT STDLINGGSF 1080 HYQDAAKPVM AVYSNGTKQN NSTFDANEVQ IPKDLISSCL ATLLMVQTCT ERQYPPAEVA 1140 QILDSAFTSL QPCCSRNLPI YQEIRLCMGL VKNQILALIP T

Sequence ? help Back to Top

Protein Sequence Length: 1181 aa Download sequence

MATRKSRSIS NKRFGKLNEE SPDKDGGSGG NKSRQRKRKL TDMLGPQWSK EELKRFYEAY  60
RKYEKDWKKV AGVVRNRSTE MVEALYHMNR AYLSLPEGTA SVAGLIAMMT DHYCIMDGSE  120
SDRESDDAPG VSQKPAKRAR GKYHVNGSRG TDADVPDLLK FPPLSSNNGC FSVKKKRTNG  180
GRRAVGKRTP RYPVSHEREK FVTPNKRGLK SDLDAHDEEV AHGAALTLAE ALQRGGSPQV  240
SHTPKRRSEH LRPSSSRKSE RRRQLDWDKS STKHRGITDE NYLEDSLGSR EAENGDFYRN  300
SIYMMDARGV GTVGVQKKGK KSLGRKPKDI ENCHRDEDRE ACSGTEEGLN LSYVKEQAED  360
EVTDSRYVRP RKKNKELKED EKQALDGLTF LANMSLELEP AAVDESESSV QFKGERGRGS  420
RGNVDNFSRH ETFSTIRQRD KSNFSGVKEK SLREVEVTTL RSAKSIKGSS FDVNSLTEEK  480
KPPSQTTIKG QKLKRKHFAA KMQSPTNESH SDLLPDERQQ IEALEENVKK STMKAKRVAA  540
AAVIAKQGKS FRPPELTSSS TDLVRPGTDA ALSTEQVPTP NQVFLPTKHE SRRKMNLQKS  600
LIRRVSNFSE DMGSKRPGKH TSQDGTLDIK DKLSRCLSSP MLRRWCAFEW FYSAIDYPWF  660
AKKEFVEYLN HVGLGHVPRL TRVEWGVIRS SLGKPRRLSQ QFLREEKEKL EQYRESVRTH  720
YTELRNGTRD GLPTDLARPL SVGQRVIACH PRTREFHDGS VLTVDRNRCR IQFDRPELGV  780
EFVMDIDCMP LNAFENMPEA LRRQNIAAGR LSENLNDPKL NNQSKDRTTG GYNSIAPSAK  840
LETADVSSQL SSPIYPMNTL IKKAEGDTVS DIAEAKAAAN ELKAAYTQPC TLAQIQAREA  900
DIRALSELSR ALEKKEALVS ELSRMNDEVH ENQINGDNSL KDHDPFKKQY ATVLIQLKEA  960
NDQVSSALIY LRKRNTYQGN SPPWQTSKPG SGVPVGPFNS IDASAFLPQE AASHVVGILE  1020
SSRVKAQTMV DVAVQALLSC KDGEDAFGSI GDALDSASTH QNGTEVRSFT STDLINGGSF  1080
HYQDAAKPVM AVYSNGTKQN NSTFDANEVQ IPKDLISSCL ATLLMVQTCT ERQYPPAEVA  1140
QILDSAFTSL QPCCSRNLPI YQEIRLCMGL VKNQILALIP T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	480	496	KKPPSQTTIKGQKLKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein