PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026449425.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 1178aa MW: 131818 Da PI: 9.5993

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026449425.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.7	2.6e-08	47	82	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE +++++a +++ ++ Wk++a + +R+ +++ XP_026449425.1 47 QWSKEELKRFYEAYRKYEKD-WKKVAGVVR-NRSTEMV 82 6***************99.*****.99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 1178 aa Download sequence
MATRKSRSIS NKRFGKLNEE SPDKDGGSGG NKSRQRKRKL TDMLGPQWSK EELKRFYEAY 60 RKYEKDWKKV AGVVRNRSTE MVEALYHMNR AYLSLPEGTA SVAGLIAMMT DHYCIMDGSE 120 SDRESDDAPG VSQKPAKRAR GKYHVNGSRG TDADVPDLLK FPPLSSNNGC FSVKKKRTNG 180 GRRAVGKRTP RYPVSHEREK FVTPNKRGLK SDLDAHDEEV AHGAALTLAE ALQRGGSPQV 240 SHTPKRRSEH LRPSSSRKSE RRRQLDWDKS STKHRGITDE NYLEDSLGSR EAENGDFYRN 300 SIYMMDARGV GTVGVQKKGK KSLGRKPKDI ENCHRDEDRE ACSGTEEGLN LSYVKEQAED 360 EVTDSRYVRP RKKNKELKED EKQALDGLTF LANMSLELEP AAVDESVQFK GERGRGSRGN 420 VDNFSRHETF STIRQRDKSN FSGVKEKSLR EVEVTTLRSA KSIKGSSFDV NSLTEEKKPP 480 SQTTIKGQKL KRKHFAAKMQ SPTNESHSDL LPDERQQIEA LEENVKKSTM KAKRVAAAAV 540 IAKQGKSFRP PELTSSSTDL VRPGTDAALS TEQVPTPNQV FLPTKHESRR KMNLQKSLIR 600 RVSNFSEDMG SKRPGKHTSQ DGTLDIKDKL SRCLSSPMLR RWCAFEWFYS AIDYPWFAKK 660 EFVEYLNHVG LGHVPRLTRV EWGVIRSSLG KPRRLSQQFL REEKEKLEQY RESVRTHYTE 720 LRNGTRDGLP TDLARPLSVG QRVIACHPRT REFHDGSVLT VDRNRCRIQF DRPELGVEFV 780 MDIDCMPLNA FENMPEALRR QNIAAGRLSE NLNDPKLNNQ SKDRTTGGYN SIAPSAKLET 840 ADVSSQLSSP IYPMNTLIKK AEGDTVSDIA EAKAAANELK AAYTQPCTLA QIQAREADIR 900 ALSELSRALE KKEALVSELS RMNDEVHENQ INGDNSLKDH DPFKKQYATV LIQLKEANDQ 960 VSSALIYLRK RNTYQGNSPP WQTSKPGSGV PVGPFNSIDA SAFLPQEAAS HVVGILESSR 1020 VKAQTMVDVA VQALLSCKDG EDAFGSIGDA LDSASTHQNG TEVRSFTSTD LINGGSFHYQ 1080 DAAKPVMAVY SNGTKQNNST FDANEVQIPK DLISSCLATL LMVQTCTERQ YPPAEVAQIL 1140 DSAFTSLQPC CSRNLPIYQE IRLCMGLVKN QILALIPT

Sequence ? help Back to Top

Protein Sequence Length: 1178 aa Download sequence

MATRKSRSIS NKRFGKLNEE SPDKDGGSGG NKSRQRKRKL TDMLGPQWSK EELKRFYEAY  60
RKYEKDWKKV AGVVRNRSTE MVEALYHMNR AYLSLPEGTA SVAGLIAMMT DHYCIMDGSE  120
SDRESDDAPG VSQKPAKRAR GKYHVNGSRG TDADVPDLLK FPPLSSNNGC FSVKKKRTNG  180
GRRAVGKRTP RYPVSHEREK FVTPNKRGLK SDLDAHDEEV AHGAALTLAE ALQRGGSPQV  240
SHTPKRRSEH LRPSSSRKSE RRRQLDWDKS STKHRGITDE NYLEDSLGSR EAENGDFYRN  300
SIYMMDARGV GTVGVQKKGK KSLGRKPKDI ENCHRDEDRE ACSGTEEGLN LSYVKEQAED  360
EVTDSRYVRP RKKNKELKED EKQALDGLTF LANMSLELEP AAVDESVQFK GERGRGSRGN  420
VDNFSRHETF STIRQRDKSN FSGVKEKSLR EVEVTTLRSA KSIKGSSFDV NSLTEEKKPP  480
SQTTIKGQKL KRKHFAAKMQ SPTNESHSDL LPDERQQIEA LEENVKKSTM KAKRVAAAAV  540
IAKQGKSFRP PELTSSSTDL VRPGTDAALS TEQVPTPNQV FLPTKHESRR KMNLQKSLIR  600
RVSNFSEDMG SKRPGKHTSQ DGTLDIKDKL SRCLSSPMLR RWCAFEWFYS AIDYPWFAKK  660
EFVEYLNHVG LGHVPRLTRV EWGVIRSSLG KPRRLSQQFL REEKEKLEQY RESVRTHYTE  720
LRNGTRDGLP TDLARPLSVG QRVIACHPRT REFHDGSVLT VDRNRCRIQF DRPELGVEFV  780
MDIDCMPLNA FENMPEALRR QNIAAGRLSE NLNDPKLNNQ SKDRTTGGYN SIAPSAKLET  840
ADVSSQLSSP IYPMNTLIKK AEGDTVSDIA EAKAAANELK AAYTQPCTLA QIQAREADIR  900
ALSELSRALE KKEALVSELS RMNDEVHENQ INGDNSLKDH DPFKKQYATV LIQLKEANDQ  960
VSSALIYLRK RNTYQGNSPP WQTSKPGSGV PVGPFNSIDA SAFLPQEAAS HVVGILESSR  1020
VKAQTMVDVA VQALLSCKDG EDAFGSIGDA LDSASTHQNG TEVRSFTSTD LINGGSFHYQ  1080
DAAKPVMAVY SNGTKQNNST FDANEVQIPK DLISSCLATL LMVQTCTERQ YPPAEVAQIL  1140
DSAFTSLQPC CSRNLPIYQE IRLCMGLVKN QILALIPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	477	493	KKPPSQTTIKGQKLKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein