PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026449529.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 572aa MW: 60735.3 Da PI: 5.6426

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026449529.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.8	3.3e-10	199	243	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++WT eEd l+ avk+lG ++W+ I + g Rt+ q+ rw XP_026449529.1 199 RKPWTLEEDNELIAAVKKLGERNWANILKadFKG-DRTASQLSQRW 243 789************************7621455.89999988888 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MASSNNSKRR KGLISEEDIA SLLKRYSAPT ILAVLKEVAQ FPDVKIDWNV LVKKSTTGIS 60 NAWEYQMLWR HLAYCGVLPE TVEEKPEPLD DDSDLEYELE TFPPASDEAS LEAAACVKVL 120 LASGLPDDAG GPATVEAPLT INIPSCQDSK SPSDNPQPSR INFTFPVSVQ KQSSPAVTTT 180 EGLDGTGPSA GSQPARRKRK PWTLEEDNEL IAAVKKLGER NWANILKADF KGDRTASQLS 240 QRWSIIRKRN SANLETVGGS GSQSELTEQQ LATRRAVSIA LNMPMNSSLS AACAVEAATG 300 SSQQIPLQTA LSLPKGTSSV TTKPRGTNKK AASVVPNPMI QAAAVAAGAR IATPSTAKSL 360 LKAAQSKSAV HISTAGKSSI PGVTPPLTPN NSGTRPNVHY ICTGLSPAMK DKVPLLSAVT 420 SASTLCGTTA AGKKTNGVTS VVVGNSSKEE KVQSSPNEDE VKNSPKEVVK TSSIDSKIKN 480 SSSEEGVKNS SSEQLVKPEE MEIDCAADIA KYGKQQDQAA LPDPDMVIED VMMQNLSKLP 540 DEEAAVSDPM QLDNHHIENE KENMRNSPAA AN

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MASSNNSKRR KGLISEEDIA SLLKRYSAPT ILAVLKEVAQ FPDVKIDWNV LVKKSTTGIS  60
NAWEYQMLWR HLAYCGVLPE TVEEKPEPLD DDSDLEYELE TFPPASDEAS LEAAACVKVL  120
LASGLPDDAG GPATVEAPLT INIPSCQDSK SPSDNPQPSR INFTFPVSVQ KQSSPAVTTT  180
EGLDGTGPSA GSQPARRKRK PWTLEEDNEL IAAVKKLGER NWANILKADF KGDRTASQLS  240
QRWSIIRKRN SANLETVGGS GSQSELTEQQ LATRRAVSIA LNMPMNSSLS AACAVEAATG  300
SSQQIPLQTA LSLPKGTSSV TTKPRGTNKK AASVVPNPMI QAAAVAAGAR IATPSTAKSL  360
LKAAQSKSAV HISTAGKSSI PGVTPPLTPN NSGTRPNVHY ICTGLSPAMK DKVPLLSAVT  420
SASTLCGTTA AGKKTNGVTS VVVGNSSKEE KVQSSPNEDE VKNSPKEVVK TSSIDSKIKN  480
SSSEEGVKNS SSEQLVKPEE MEIDCAADIA KYGKQQDQAA LPDPDMVIED VMMQNLSKLP  540
DEEAAVSDPM QLDNHHIENE KENMRNSPAA AN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	7e-72	MYB_related family protein