PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026449577.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family ARF
Protein Properties Length: 935aa    MW: 102618 Da    PI: 5.5919
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026449577.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.43.2e-24153254199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae+       ++++++ ++l++ d++ +sW++++iyr++++r++lt+GW+ Fv +++Lk+gD v+F +d  ++
  XP_026449577.1 153 FCKTLTASDTSTHGGFSVPRRAAEKLfppldySMQPPT-QELIVHDLHDNSWTFRHIYRGQPKRHLLTTGWSVFVGSKRLKAGDAVLFIRD--ER 244
                     99*********************999*****9555554.49************************************************54..56 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l+v+v+r+
  XP_026449577.1 245 SQLMVGVRRA 254
                     666*****97 PP
2Auxin_resp111.77.4e-37279362183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+++s+F+++YnPra++seFv+++ +++ka++ ++vsvGmRf m++ete+s +rr++Gtvvg+sdld +rWpnSkWr+L+
  XP_026449577.1 279 AAHAAANRSPFTIFYNPRACPSEFVIPLTRFQKAVYgTQVSVGMRFGMMLETEESGKRRYMGTVVGISDLDHLRWPNSKWRNLQ 362
                     79**********************************9*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 935 aa     Download sequence    
MGSVIEEKIK TTSAATAGLI NMAAQPTKEE MKALKEFQDQ SEAKKSINSE LWHACAGPLV  60
SLPQTGSLVL YFPQGHSEQV AVSTKRAATS QIPNYPGLPS QLTCQVHNVT LHCDKETDEI  120
FAQMTLQPVN SEKDVFPFPD FGVKINKHPT EFFCKTLTAS DTSTHGGFSV PRRAAEKLFP  180
PLDYSMQPPT QELIVHDLHD NSWTFRHIYR GQPKRHLLTT GWSVFVGSKR LKAGDAVLFI  240
RDERSQLMVG VRRANHQQTN LPSSVLSADS MHFGVLAAAA HAAANRSPFT IFYNPRACPS  300
EFVIPLTRFQ KAVYGTQVSV GMRFGMMLET EESGKRRYMG TVVGISDLDH LRWPNSKWRN  360
LQVEWDEAGC GDKQNRVSLW DIETPESLFI FPSLTSNLKR PVHSGFGEND WGNLFKRPFA  420
RGPENGTGAF SYSSFPSLLK PPAAGPIGAM SAGYLPPCVT RGTPLLVGES SVKPFASQKS  480
QFLSIDGTSL QNHNSCQNIL DVPQILKSNL LPQTHARENI NPPFKVESQS SPKPQSEKPE  540
TRPVVVSDQL NQSASSSKCT EDKLDGSMNS HTLVNQMLHP NQGMLLPQTS QQLEPNTLLQ  600
HQIDTLPFDA SNATGLLPYP MNLSSSQYLD NDDWMLHSGQ SLAGILRSPA PPSGCGLEDL  660
PMLYSEMGNV AATSLGQETW ASQLNYLRYL SQEQELTPCL QRLPTTLQGF SNSGVGLKDL  720
SGDSKNQCEI YSVHFESSNG GSTIIDPSVS STAFDGIGSL GIEGFQSSNC LVGNFSSNQD  780
VQSQITTASM VDSQAFSLQE LQDNSGGTSS SNIDLDDTGL LQNGSWQQIS PPLRTYTKVQ  840
KVGSVGRSID VTRFKNYDDL RSAIACMFGL DGMLDDPRGS SWKLVYVDYE NDVLLVGDDP  900
WEEFVSCVRC IRILSPSEVQ QMSEDGMNLL SNTVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein