PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026449677.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 246aa MW: 28644.9 Da PI: 8.7609

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026449677.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.6	3.2e-19	25	72	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll+++v ++G g+W+++a+ g++R +k+c++rw +yl XP_026449677.1 25 KGPWTAEEDKLLIEYVSLHGEGRWNSVAKFAGLRRNGKSCRLRWVNYL 72 79********************************************97 PP
2	Myb_DNA-binding	56	9.3e-18	78	122	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr T++E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ XP_026449677.1 78 RGRITPQEENIIIELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 122 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MDEENLMMSS WGTTGISNQE EEWRKGPWTA EEDKLLIEYV SLHGEGRWNS VAKFAGLRRN 60 GKSCRLRWVN YLRPDLKRGR ITPQEENIII ELHARWGNRW STIARSLPGR TDNEIKNYWR 120 THFKTKGKKS SENPEKSKKR LLRKQQFQYE QQQQQLQQKN HMDLKRIMSV LEDNDNTVSC 180 NFATYPNYNN INNFADQYVL SDNSSANAVQ VDLPGGSTRD NTWSGLWNLD DLHASLDALC 240 ASSTPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	1e-71	MYB family protein