PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026449762.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 245aa MW: 28156.6 Da PI: 7.0015

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026449762.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.2e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd++l+ ++ ++G g+W++ ++ g+ R++k+c++rw +yl XP_026449762.1 14 RGPWTVEEDQILITYISRHGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	49.4	1.1e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E+e ++ ++k+lG++ W++Ia++++ gRt++++k+ w+++l XP_026449762.1 67 RGNFSSQEEETIIMLHKMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MVRAPCCEKM GLKRGPWTVE EDQILITYIS RHGHGNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF SSQEEETIIM LHKMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLCKQN 120 QTNPAAEHYA MDISKPTGES NSSKLEDQNY VHLSPQHSSS EFSSSTEFSD ANADNHINGN 180 TNMDENIWSQ AFSVENFKTN EDYPAITTDP YFQVPSPMLS TTTYESSVQY TDFWYKLLME 240 AGELM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	5e-76	MYB family protein