PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026450262.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 232aa    MW: 26973.4 Da    PI: 7.0488
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026450262.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF85.14.3e-271059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    +i+n + rqvtfskRrng++KKA+ELS+LCdaev +i+fsst+klye+ss
  XP_026450262.1 10 KIDNITSRQVTFSKRRNGLIKKAKELSILCDAEVGLIVFSSTDKLYEFSS 59
                    79**********************************************96 PP
2K-box66.68.5e-2376168897
           K-box   8 s...leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     +   +++++a+ +++e+a L+ + +nLq+   +++G++L sLs +eLq+Le+qLe sl+ +  +K++ll+++i++l +k + l++en++L +k
  XP_026450262.1  76 NplmNASTEAKFWKREAATLRHQFQNLQEGYWQMMGQELCSLSANELQNLENQLELSLRGVHMQKDQLLTDEIRKLNQKRNLLRQENMELFNK 168
                     3456788999*******************************************************************************9877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MGRGKIVIQK IDNITSRQVT FSKRRNGLIK KAKELSILCD AEVGLIVFSS TDKLYEFSST  60
SMNSLLERYD TSKEENPLMN ASTEAKFWKR EAATLRHQFQ NLQEGYWQMM GQELCSLSAN  120
ELQNLENQLE LSLRGVHMQK DQLLTDEIRK LNQKRNLLRQ ENMELFNKEH HTRQENLDLL  180
RKINEARDAN ETDRMSHSPN GFNLEEDIKV QLSQPQQQNC DTPRGEKATT LS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.19e-74MIKC_MADS family protein