PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026450822.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 345aa MW: 38738.7 Da PI: 5.464

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026450822.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.1	7.3e-17	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++ +G+g+W++++ g+ R+ k+c++rw +yl XP_026450822.1 15 KGPWTPEEDLILASYIEGHGPGNWRSVPTNAGLSRCSKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	35.4	2.5e-11	68	112	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+ E+ ++ + +++G++ W++Ia+ ++ Rt++++ ++w+ + XP_026450822.1 68 RGNFTELEENNIITLQRLWGNK-WAAIASNLP-QRTDNDINNYWNAH 112 89******************.*****.*********977 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MGRPPCCDKV LGIKKGPWTP EEDLILASYI EGHGPGNWRS VPTNAGLSRC SKSCRLRWTN 60 YLRPGIKRGN FTELEENNII TLQRLWGNKW AAIASNLPQR TDNDINNYWN AHRKKKLKNK 120 FRSHHLGSSS TSLQFLNKNF TSSSTSTPSS TTYASSTENI SRLLEDCVKN SPNKFSSGAL 180 KLKTTQTEEK VLPSGSNNSD NNNPNNGNNN PYNYDELLIK KFEVQDTCNS DDYVISNEAD 240 YFESLFPFES TSIGCWEQKS SSDSSTTIHD STSPSPEEPQ TTTITTTAAT PTEDRVNSIS 300 GSDHQGMIVD DQNQRPPFSL LEKWLLDEAT VQVLEEDQME IYPKF

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MGRPPCCDKV LGIKKGPWTP EEDLILASYI EGHGPGNWRS VPTNAGLSRC SKSCRLRWTN  60
YLRPGIKRGN FTELEENNII TLQRLWGNKW AAIASNLPQR TDNDINNYWN AHRKKKLKNK  120
FRSHHLGSSS TSLQFLNKNF TSSSTSTPSS TTYASSTENI SRLLEDCVKN SPNKFSSGAL  180
KLKTTQTEEK VLPSGSNNSD NNNPNNGNNN PYNYDELLIK KFEVQDTCNS DDYVISNEAD  240
YFESLFPFES TSIGCWEQKS SSDSSTTIHD STSPSPEEPQ TTTITTTAAT PTEDRVNSIS  300
GSDHQGMIVD DQNQRPPFSL LEKWLLDEAT VQVLEEDQME IYPKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08810.1	1e-69	MYB family protein