PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026450926.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 610aa MW: 70819.6 Da PI: 7.1805

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026450926.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.2	9e-09	404	443	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT++E +++ +++G++ Wkt a+ +g + ++++k+ w+ XP_026450926.1 404 KWTEDEKAFVLKYYEKHGPD-WKTMAEVLG--KNRYHVKDIWR 443 8***************88.999998..899***9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 610 aa Download sequence
MDEENVLRKS EKKKHKRNKD IEALSASEVP TEEKKKKHKR NKEIEALSSS EVPTEEKNKK 60 KKHRKSEEKE SLSTPEVPTE KKKKKKHERN KEIEALSTSE VPTDVGGEKG SEEKEESATD 120 EAASEGKDHI DVSGEENNEH VKKGKGKKNK RKNENGGDYG ESCIEKSDGE KKKKKKKGTK 180 SDANIGDVET QNNLGSTNEH LRNSGTKKSS KRVKFSNHVE VFPAADDQDD QEEDAGTELV 240 QCKRFTREED QIIKDAVHRY MEIHELGEDG LDMILHSEKH PNIRGCWKEI GAALPYRHVN 300 AVCQRAHTLF TREDQDDVEE NPGMELVRGK RFTKEEDQIL RDAVHKYIKI HELGEDGVDM 360 VLHSGKHRNV RGCWKEIGAS IPYRPTEAVY QRAHTLFTRD ESRKWTEDEK AFVLKYYEKH 420 GPDWKTMAEV LGKNRYHVKD IWRRIYRTGL RKGKWTQEEY QSLFNLVNMD LRMHVCEEKK 480 LKHGMIRDNI GWKAISKSLA TRTDMDCCTK WYKQLSSSMV KEEKWADVDD YWLLDELLRL 540 DACCVEDVDW DNLLEHRPGD ITLKRWRQMV NHIGIHGLLS FAEQVEVLAK RYCPELLEVR 600 EALDSRPVVD

Sequence ? help Back to Top

Protein Sequence Length: 610 aa Download sequence

MDEENVLRKS EKKKHKRNKD IEALSASEVP TEEKKKKHKR NKEIEALSSS EVPTEEKNKK  60
KKHRKSEEKE SLSTPEVPTE KKKKKKHERN KEIEALSTSE VPTDVGGEKG SEEKEESATD  120
EAASEGKDHI DVSGEENNEH VKKGKGKKNK RKNENGGDYG ESCIEKSDGE KKKKKKKGTK  180
SDANIGDVET QNNLGSTNEH LRNSGTKKSS KRVKFSNHVE VFPAADDQDD QEEDAGTELV  240
QCKRFTREED QIIKDAVHRY MEIHELGEDG LDMILHSEKH PNIRGCWKEI GAALPYRHVN  300
AVCQRAHTLF TREDQDDVEE NPGMELVRGK RFTKEEDQIL RDAVHKYIKI HELGEDGVDM  360
VLHSGKHRNV RGCWKEIGAS IPYRPTEAVY QRAHTLFTRD ESRKWTEDEK AFVLKYYEKH  420
GPDWKTMAEV LGKNRYHVKD IWRRIYRTGL RKGKWTQEEY QSLFNLVNMD LRMHVCEEKK  480
LKHGMIRDNI GWKAISKSLA TRTDMDCCTK WYKQLSSSMV KEEKWADVDD YWLLDELLRL  540
DACCVEDVDW DNLLEHRPGD ITLKRWRQMV NHIGIHGLLS FAEQVEVLAK RYCPELLEVR  600
EALDSRPVVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	34	62	KKKKHKRNKEIEALSSSEVPTEEKNKKKK
2	59	87	KKKKHKRNKEIEALSSSEVPTEEKNKKKK
3	59	86	KKKKHRKSEEKESLSTPEVPTEKKKKKK
4	171	177	KKKKKKK
5	171	211	KKKKKKKGTKSDANIGDVETQNNLGSTNEHLRNSGTKKSSK
6	172	212	KKKKKKKGTKSDANIGDVETQNNLGSTNEHLRNSGTKKSSK
7	173	213	KKKKKKKGTKSDANIGDVETQNNLGSTNEHLRNSGTKKSSK
8	174	214	KKKKKKKGTKSDANIGDVETQNNLGSTNEHLRNSGTKKSSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	1e-107	MYB_related family protein