PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026451179.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 266aa MW: 29897.1 Da PI: 7.3621

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026451179.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	7e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+d+++++G+g +W + +++ g++R++k+c++rw++yl XP_026451179.1 14 RGPWSPEEDTTLKDYIRRHGTGsNWISLPQKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	38.5	2.6e-12	71	111	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++eEd ++ + k G++ W+ Ia+ ++ gRt++++k++w++ XP_026451179.1 71 YSEEEDNIICTLYKNIGSR-WSIIASQLP-GRTDNDVKNYWNT 111 69***************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MGRAPCCDKA SVKRGPWSPE EDTTLKDYIR RHGTGSNWIS LPQKAGLKRC GKSCRLRWLN 60 YLRPDIKHGG YSEEEDNIIC TLYKNIGSRW SIIASQLPGR TDNDVKNYWN TKLKKKFMAP 120 ATTTPPKPNY LLNTNNQIRQ QLTSSVSLSP SLTSPPPLTN LYASIPVMDN HVRVSDFSYS 180 PAELDFGSEN QKQDSNPIYE IESSSTSQAI SNHYYPNCYY FTSSTTWSSD NATIDNGSGG 240 GGEEYDSLFK EFGFDPSSSS DYFWIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	6e-73	MYB family protein