PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026451319.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 203aa    MW: 22670.7 Da    PI: 5.8336
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026451319.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF39.19.8e-131060251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHH.HT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvL.Cdaevaviifsstgklyeyss 51
                     i++  +r vtfskRr gi  KA EL+ L  d+ v +i+fs+ gk +++s+
  XP_026451319.1 10 TINDPKKRIVTFSKRRGGIESKAAELCKLfPDIIVGIIVFSPGGKAFTFSN 60
                    689999*********************8846******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MGRKKIEIET INDPKKRIVT FSKRRGGIES KAAELCKLFP DIIVGIIVFS PGGKAFTFSN  60
SPLGVCNMVE RFLKEETKDK KQEDGNAHEA KNSTYVQECT NKAGAGSRSD RYWWDNIDME  120
ELDSVEKLKS LGESLENLKQ NLSARKEKLT AAALSTSSST IEDTIIEDRI VEDAATSITE  180
KHEAGKIYCK EHPNLDLSLN LGW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.14e-16M-type_MADS family protein